Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01556 ATGGTGATGATCACTCAATACCAAACCTTCCTTTACAAAGAACTTTCTATctcctttttcattttcttgttaACCCATTTCATCATAAgttttctctttaaaaaaaatcacaaaaaactTCCACCTGGCCCAAAGGGTTATCCAGTTGTAGGGGCACTCCCACTAATGGGAAGCATGCCTCATCTTACCCTATTCAAAATGTCACAAAAGTATGGCCCCATAATGTACCTAAAAATGGGATCAAACAACATGGTTGTAGCATCAACTCCTTCTTCAGCCAAAGCGTTTCTCAAAACACTTGACCAAAATTTCTCCAATAGGCCGCCCAACGCTGGCGCGACTCACCTAGCTTATGATTCACAAGATATGGTTTTCGCCGACTATGGATCTAGGTGGAAATTACTTAGGAAACTAAGTAACTTACACATGCTCGGCGGAAAGGCCCTTGAAGATTGGTCGAAAGTTCGCGAGGTTGAAATGGGGCACATGATTAGTACAATGTACGATTGTAGTAAGAAAAACGAAACCGTTGTTGTGGCCGAAATGTTGACATATGCTATGGCCAATATGATAGGTCAAGTTATATTGAGCCGTCGCGTGTTCGAGACTAAAGGTAGtgaatcaaatgaatttaaGGATATGGTTGTTGAGCTCATGACAACTGCTGGATATTTTAACATTGGTGATTTTATACCAATTCTTGCTTGGTTGGATCTTCAAGGAATTGAAAGAGGGATGAAGAGGTTACACAAAAAATTTGATGCTttgttgataaaaatgattGAGGAGCATGTGGCTTCTAGTCATAAAAGTCCAAGGGTTAAGCCTGATTTCTTAGACACTCTTATTGCTCAAAGTAAGGAAGATTCTGATGGGGAGAAATTAACACTCACTAACATCAAGGCATTACTTTTGAATCTATTTACCGCAGGAACAGATACATCTTCAAGTATCATAGAATGGTCCCTAGCAGAAATGTTGAAGAACCCTAAAATAATGAAAAGAGCTCATGAAGAAATGGACCAAGTAATAGGCAAAGATCGTCGACTCCAAGAGTCGGACATTCAAAAACTTCCTTATTTACAAGCAATTTGCAAAGAAACATTTAGAAAACATCCATCAACACCACTAAACTTGCCAAGAGTTTCGTCACAAGCATGTGAAGTAAATGGATATTACATACCAAAAAACACTAGACTAAGTGTGAACATTTGGGCCATAGGAAGAGACCCAAATGTGTGGGAAAATCCTTTGGAATTTAATCCTGAAAGGTTTCTGAGTGGTAAAAATGCTAAAATTGATCCGCGCGGAAATGATTTCGAGTTGATTCCATTTGGTGCCGGGAGAAGAATTTGTGCTGGGACAAGAATGGGGATTGTGCTTGTTCAATACATTTTGGGAACTTTGGTGCATTCATTTGATTGGAAGTTACCAAATGATGTTATGGATTTGAACATGGATGAGTCATTTGGGCTTGCTTTGCAGAAAAAAGTTCCTCTTGCTTCTTTTGTTAGCCCAAGATTGTCTCCATCTGCTTATATTCCTTAA 1548 0.376 MVMITQYQTFLYKELSISFFIFLLTHFIISFLFKKNHKKLPPGPKGYPVVGALPLMGSMPHLTLFKMSQKYGPIMYLKMGSNNMVVASTPSSAKAFLKTLDQNFSNRPPNAGATHLAYDSQDMVFADYGSRWKLLRKLSNLHMLGGKALEDWSKVREVEMGHMISTMYDCSKKNETVVVAEMLTYAMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPILAWLDLQGIERGMKRLHKKFDALLIKMIEEHVASSHKSPRVKPDFLDTLIAQSKEDSDGEKLTLTNIKALLLNLFTAGTDTSSSIIEWSLAEMLKNPKIMKRAHEEMDQVIGKDRRLQESDIQKLPYLQAICKETFRKHPSTPLNLPRVSSQACEVNGYYIPKNTRLSVNIWAIGRDPNVWENPLEFNPERFLSGKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVQYILGTLVHSFDWKLPNDVMDLNMDESFGLALQKKVPLASFVSPRLSPSAYIP 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01556 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 Pfam Cytochrome P450 41 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 PANTHER FLAVONOID 3'-MONOOXYGENASE 12 506 - -
Tsu03g01556 515 PANTHER CYTOCHROME P450 71B11-RELATED 12 506 - -
Tsu03g01556 515 SUPERFAMILY Cytochrome P450 41 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 Gene3D Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01556 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01556 Tsu-Chr3 15416087 15419470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01556 11 513 Cytochrome P450 AT5G07990 48.134 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01556 K13083 - gmx:547705 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01556 03 15416087 15419470 Tsu03g01556 03 15416087 15419470 ECH