Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01555 ATGGAAGGAGAAAGTAAGAAGAAAGCCACTTTCAATGACTATGGTTTCAtggatttgattttttcttGGTCTATTGAAGATATTTTAGATGAAGAATTCTacaagaacaagGTAGAAAAGATTGGACTATCATTTCAGTCCATTAGTCAGTATCTTGGATCTTACAAATATCCGATACTTGAAGAAACTCGAGCGAGTCTATCCTCAAGTATGGAAATCATTTACCAAGCACCTTATGGAAGAGTAACTGGACTTAAATTGGCCAAAccatttaaaaacaaaagtgaTAATGAAATGGACAAACCGTTGAAAAACAAACTGTATAACTTGAAAATCGACCGCTGGGAAAACAGGTTTGTTCTTCGCGGAGAGCCATACAAAACATTACCAGGAGATGTATTGGTTTTGGCTGATTGTAACCCAGAATCAGCAAACGATCTGCAAAGATTCAGTAGAATGTGGTGTTTTCTGTCAATTGTGAAGACAGAAGACGATAATGATGGCGAGAATATAAATTCTGTTTGTTTTAAAGTTACGGCATCAAAAGATCTTGACCTGGAGGAGTTAAGATACAAATCTCTATATATTGTTTTCTTAACAAACGTTGGCTCTAACAGAAAAATCTGGACTGCTCTCCACATGACTAGTGGTAATCCAAAGCTATTCAAACAAATCTTATGTAACAGTGATGATTTGGTTAAGGGAAGTTGCAAGTGCATTTCTCTAGCTGATACTATATTGGATGATTGTTCATATCAAAGATTAACATCAGGGATGAATGAATCGCAAAACATTGCGATTCATGATTGTCTTTCTGGCATTCATTGCAATCACAATCCTACAGTTAAACTTGTTTGGGGTCCTCCTGGGACTGGAAAGACGAAAACTTTAGGAACATTGCTGTATGTTCTAATGAAAATGAGATATAGAATCCTGGTGTGTGCACCGACTAATGTTGCAATCAAGGAAGTGGCTTCGCGTGTGTTGCATGTAGTAAGAGAGGAACTTTGCTGCCAATCTGGTGATTTGGTCTTTTCTCCAGGTGACATGATGTTGTTAGGGAATATTGAAAGGCTTGATGTTGGTGGTGAGGATGTGGAAgatatatttttggataatcGTGTCCAACAGCTCCGGACATGTTTATCGACTTATACTGAATGGAGACATTGTTTTGAAACAATGATTAATCTTCTTAAATATTGTGTTTCTGATTATCAAGTCTATCTGAATGAGATAGAAAGGGTGAATAAGATAAAAAGGGATAAATTAGCCATTACGCCAAAGTCATTTCTGGAGTTTCTGAGAGATAAGTTTCGTTATAGAGCATTGCAAGTGAAGGACTGTATCTCTAGCTTTTGCAATCATGTACCAATGTGTCTCCTTTTACAACAAAATTATAGGAACTTAGTGCGTTTAAATGAGACACTTGAATCATTTCAAAAAATGTTGTCTCAAGAGAATTTGTCTTCTGAAGAGTTGAAGACACTTTTCCGTAATCTCGTAATACCTGAGGATTTTTCTTGGTATTTTAAGAATGCTGCTGCACAACATATGTTCAAGAAGAGAAATCAATGTTTATCAGCTTTAAAAGGTGCAAAAGATTCACTCGACATACTTGAGTTGAAAAGTTTTAAAGATGACGATGCAGTTagagatttttgttttgaaaatgcGCGAATAATGTTTTGCACAACATCTAGTTCCTTTAGGCTACACAAGGTTTCTATGAAGCCAGTGAACCTTTTGGTGATCGATGAAGCTGCTCAGCTCAAAGAGTGTGAATCGATAATACCTTTACAACTTCCGGGAATCAGCCACGCCATACTTGTTGGTGATGAGTGTCAACTTCCAGCTATGGTCAGAAGTAATGTTTGTACTGATGCTGGTTTTGGCCGAAGCCTATTTGAGAGGTTGAGTTTATTGGGTAGCCCAAAAAACCTTCTCAACGTGCAGCATAGGATGCATCCGGAAATAAGTTTATTTCCAAATTCACATTTCTATAATAACAAAATTCGTGATGCTCCAAATGTTGAAAGAAATTACGGCAAGCAATATCTTCCCGGACCAATGTTTGGTCCCTATTCTTTTATAAATGTAGCTGGTGGAAGAGAggaatatgatgatgatggaagAAGTTATAAGAATATGGCTGAAGTTGCTGTCGTCATGACAATACTGAAGAATTTACATAAAGGCTCATGGCTAGCTACGAAGGAGAAACTTTCCATCGGCATAGTTTCTCCATATGCTGGACAAGTACTCATGTTTCAAGAGAAACTAGCCAGGATGAATGATTTTATCCATGACGGATTTAATGTGAATGTGAAATCAATTGATGGTTTCCAAGGTGGCGAGcaggatattattatattatcaaCTGTTAGAACAAATTACAGAACTTCGCTTCAGTTTCTTTCATCTCGTCAAAGAACTAATGTTGCGCTTACAAGGGCTAGGTATTGCTTATGGATTTTGGGCAATGAAAAGGCTTTGGCAAGCAATGACAATGTTTGGAAGAGTTTGGTGCTTGATTCCAAGAATCgtggatttttctatcatgcgGATCGAGACACTGAAATGGCTAAGGCTATCTTTGATTCCATAAAAGAGTTAGATCATTCGCTTGATTTGCTTGATACAAATAGTGTCATTTTCAGAAATACTATGTGGAAGGTAATCTTCAGTGATAGATTCCGTAGATCATTCAAAAGGGTGCGTACTCAACAGAGCAAAAACTCGGTCATAAATGTTTTAGAAAGACTTGCGAATGGATGGAGGCCAAGAGGGCGTAGTATAGAAATTGTTTGTGAAAATTCATCTAAGATTCTGAAACAATTTAAGGTTGAAAGTCGGTACATTATTTGTTCAATAGAGATTGTGGCGGATTTTAGTGGCCACATTCAGGTTCTCAAAGTGTTCGACTTGGTGCCAGTAGAAGATATTCCAAAATCTGCTAAGCGCCTCGATTGTGAATTCAGAAGATACACCGATGAATATATTGCGTGCTGCAATGAGAAAGGTTTTGATGGAAAAATAGAGTTTCCTTTGAGCTGGCCGAGAAGTGCGAATATCCAAAAACTGAAGAGTGTCGGTACTAATATCACAAAGGAGAGTGATTTAGTTTCATCTGATGAAAACGATCGTGCTCAAAACTCAATGATTGAGGAAAGTACATTGTTGATGAAGTTCTGCAGCATTTCACTAGATTACACGCTTGCCAGCTCTGATTCTGTTGAAGTGGACCTTCCATTTGAGTTAACTGAAGAACAACGTAACATAGTTGTCTTCTCTAAGACTACATTTCTACTTGGTCGACCAGGGACTGGAAAAACTACAGTTCTTACGACTAAGATGATTCGAAATGAGAAAATGCACCATGTAGCTCTTGAAAGAGTTTATGGTCCCTATTCCAATGCAAGTGAGTCTAGTGAGAGTGCTGTTGAGATTAAGAGACCGGTATTACGCCAATTATTTGTGACGTTGAGTCCTGGACTTTGCCAAGAGATCAAAAACCatgtttcttattttaaaagGTATGCGTCTTCTAATACAATACTCTATAATTGTTCGTATCAAGTGAAAATTTTGTCCtcacaatttaatttattctcttGCAGGTCCCTAGGGGAGATTGGTTCAATTGATGAAGATATTGACGATGCAACATTCTCTTTTTCTGATCTTCCGTCCTATTTTTATCCGCTCGTGATTACATTTCGCAAATTTTTGCTGATGCTTGATATGACTTTGGGTAATTCATATATCAAAAGATTTTCTGATCTCAAGAAGGAAGTGAGCTATGAAAAATTTGATTCAATATACTGGCCTCATTTTAATTCCCAATTGATCAAAAAGTTGGATTCTTATCTTGTGTTCACAGAAATAATGTCACACATAAAAGGCGGAATTAAAGAAGCAGACACAGGTAAGTTGAGTCGTGAGGACTATTGTACTTTATCGGCAAGCCGAGCATCAAGTAGTTTGAGCATGAAGGCAAGagatatgatatatgatatatttcAAAACTACGAGAAAATGAAGATGCAAAAGGGAGAATATGATATGGCTGATATTGTACTTGATCTCCATCATAGACTGAGGAATGAAAAATACAAGGGTGACTTAATGAACTTTGTGTTTGTTGATGAAGTGCAAGATCTCACAGTGTCGCAAATTGgtttatttaaacatatttgTAGAAATGTTGAAGATGGTTTTGTTTTCTCTGGAGATACTGAACAAACCATTGGAAGGGGTATTGATTTTAGATTCCAAGATGTACGATCACTCTTCTACAAGAAGTTTGTGTTGGAATCTAAAAGTCGGTGTgtggataaaaaaaatgagaaagcGAAAGGATGTGTTTCTGATATTTTCATGTTGAGTCAAAACTTCAGTACACATGCTGAGGTGTTGAAGTTGTCACAAAGTATCATTGAACTTTTGTTACATTTCTTTCCGAATTCTATTGACAACTTGAAGGTCGAGACAAGCTTGGTGTATGGAGAATCTCCTATTGTTCTCCAATCTAGAAATGGAGAAAATCCAATTCTAACAATTTTTGGAGGAAATGGATACAATGGTGGGAACATTGGAAGGTTTAGTGAAGAACAAGTAATTTTGGTAAGAGATGATTCTTCTAAGGAAGAAATCACGCGGCTTGTCGGAAAACAAGCTCAAGTTTTGACTATTTTGGAGTGCAAGGGCCTTGAATTTAAGGATGTCTTATTGTATAACTTTTTTGCTTCTTCTCCATTGAAAAGGCGGTGGGGGATAGTATACGAGTACATGAAGGAAAATAATATGCTGGACTCTCGATCGCCTATCCACTGTCAATGTTTTATTGAATCAAAGCATAACGTTTTGTGTTCTGAATTGAAGCAACTATATGTTGCTTTAACTAGAGCAAGAAAGAGGTTGAAGGATGAAAGAATTGAGATCAAGGTGCAAAAAGatgaatCAGGAAGACAAAGTTTAGTACTACTAATGATGCAACTTTTGGATCTTGAGGCACAAGGAAGCTATTTAAATATTGTAGAGATTGCTCaAGATATTGGTATTTCACTTTTCATCTTCTTAATCTCATACTTCTCCATAGGCTTAATCTTCAAAGTCACTTCTAAAAATCTCCCACCAGGTCCAAAAGGATGGCCAATTCTTGGTGTTCTACCACACTTAGGAACCATGCCACATGTCACACTAGCAAACATGGCTAAGAAATTTGGACCCATCATGTACCTCAAAATGGGCACTTGTGACACTATTGTTGCCTCAAGTCCAAATGCAGCTAGAGCATTTCTCAAGACTTTGGATCATAATTTCCTAAATAGGCCCACTATTATTGGTGCAACTCATTTGGGCTATAACTCACAAGaccttgtttttgcaaaatatggGCCTAAATGGAAACTACTTAGGAAACTAACAACCTTACACATGCTTGGTGGAAAAGCACTTCAAAATTGGAGTAATGTGAGAGAAAAAGAGGTAAAAAATATGGTGAGATCTATTCATGAGTTTGGGATAAAATGTGAACCAATAGAGATTGGTGATTTGTTGAGTTGTGCAATAACAAATATGGTAAGTGAAGTTGTACTAAGCAAACGTATATTTGCAAATAAAGGACAAGAGTCAAAGGAGTTTAAGGAAATGGTTGTGGAGTTCATGACAATTTCTGGAGTCAACATTGGTGATTTTATACCTTTCATTGGTTGGATGGATTTGGGAGGTGTGGTTAGTAAAATGAAATGTTTGCATAAGAAGTTTGATGTGTTTTTGACTAAAATGATTGAAGATCATGTGAAGTGTGCTCATGAACGTAAAGAGAAGcctaattttttggatattttgatggcaaatggtgatgatgatgattttggtgagAGGTTGAGTTTGTCCAACATCAAAGCTCTTTTATTGAATTTGTTCACTGCAGGGACAGATACATCATCTAGCATCATAGAATGGGCACTTGCTGAAATGCTAAGAAACCCACACATCTTGTTAAGGGCCCAAAAAGAAATTGATCAAGTAGTAGGCAAGGGAAGAATGCTAGTTGAATCTGACCTACAAAAATTACCATACCTTCAAGCAATTTGCAAAGAGACATATCGTTTACATCCATCTACACCCCTTAGTGTTCCAAGAGTGTCAAATAAAGCATGTCAAATAAATGGATACTACATTCCCAAGGATACAAGGTTCAATGTGAACATATGGGCCATAGGGCGAGACCCGGATATTTGGGCTAATCCGTTAGAGTTCAATCCAGAAAGATTTTTGAGTGGAAAGAATGCGAGAATTGATTTAAATGGAGTTGATTTCGAGTTGATTCCTTTCGGAGCTGGAAGGAGGATTTGTGTTGGGTATAGAATGGCTATTGTGGTGATAGAGTACATTTTAGGCACATTGGTGCACTCTTTTGATTGGAAATTACCAATTGGTGTTGAGCTAAACATGGATGAGGCCTTTGGACTTACTTTACAAAAGGCAGTGCCTTTATCGGCTATGGTTATTCCGCGATTGGTGTCAAATGTTTATGTTTAA 6549 0.3573 MEGESKKKATFNDYGFMDLIFSWSIEDILDEEFYKNKVEKIGLSFQSISQYLGSYKYPILEETRASLSSSMEIIYQAPYGRVTGLKLAKPFKNKSDNEMDKPLKNKLYNLKIDRWENRFVLRGEPYKTLPGDVLVLADCNPESANDLQRFSRMWCFLSIVKTEDDNDGENINSVCFKVTASKDLDLEELRYKSLYIVFLTNVGSNRKIWTALHMTSGNPKLFKQILCNSDDLVKGSCKCISLADTILDDCSYQRLTSGMNESQNIAIHDCLSGIHCNHNPTVKLVWGPPGTGKTKTLGTLLYVLMKMRYRILVCAPTNVAIKEVASRVLHVVREELCCQSGDLVFSPGDMMLLGNIERLDVGGEDVEDIFLDNRVQQLRTCLSTYTEWRHCFETMINLLKYCVSDYQVYLNEIERVNKIKRDKLAITPKSFLEFLRDKFRYRALQVKDCISSFCNHVPMCLLLQQNYRNLVRLNETLESFQKMLSQENLSSEELKTLFRNLVIPEDFSWYFKNAAAQHMFKKRNQCLSALKGAKDSLDILELKSFKDDDAVRDFCFENARIMFCTTSSSFRLHKVSMKPVNLLVIDEAAQLKECESIIPLQLPGISHAILVGDECQLPAMVRSNVCTDAGFGRSLFERLSLLGSPKNLLNVQHRMHPEISLFPNSHFYNNKIRDAPNVERNYGKQYLPGPMFGPYSFINVAGGREEYDDDGRSYKNMAEVAVVMTILKNLHKGSWLATKEKLSIGIVSPYAGQVLMFQEKLARMNDFIHDGFNVNVKSIDGFQGGEQDIIILSTVRTNYRTSLQFLSSRQRTNVALTRARYCLWILGNEKALASNDNVWKSLVLDSKNRGFFYHADRDTEMAKAIFDSIKELDHSLDLLDTNSVIFRNTMWKVIFSDRFRRSFKRVRTQQSKNSVINVLERLANGWRPRGRSIEIVCENSSKILKQFKVESRYIICSIEIVADFSGHIQVLKVFDLVPVEDIPKSAKRLDCEFRRYTDEYIACCNEKGFDGKIEFPLSWPRSANIQKLKSVGTNITKESDLVSSDENDRAQNSMIEESTLLMKFCSISLDYTLASSDSVEVDLPFELTEEQRNIVVFSKTTFLLGRPGTGKTTVLTTKMIRNEKMHHVALERVYGPYSNASESSESAVEIKRPVLRQLFVTLSPGLCQEIKNHVSYFKRYASSNTILYNCSYQVKILSSQFNLFSCRSLGEIGSIDEDIDDATFSFSDLPSYFYPLVITFRKFLLMLDMTLGNSYIKRFSDLKKEVSYEKFDSIYWPHFNSQLIKKLDSYLVFTEIMSHIKGGIKEADTGKLSREDYCTLSASRASSSLSMKARDMIYDIFQNYEKMKMQKGEYDMADIVLDLHHRLRNEKYKGDLMNFVFVDEVQDLTVSQIGLFKHICRNVEDGFVFSGDTEQTIGRGIDFRFQDVRSLFYKKFVLESKSRCVDKKNEKAKGCVSDIFMLSQNFSTHAEVLKLSQSIIELLLHFFPNSIDNLKVETSLVYGESPIVLQSRNGENPILTIFGGNGYNGGNIGRFSEEQVILVRDDSSKEEITRLVGKQAQVLTILECKGLEFKDVLLYNFFASSPLKRRWGIVYEYMKENNMLDSRSPIHCQCFIESKHNVLCSELKQLYVALTRARKRLKDERIEIKVQKDESGRQSLVLLMMQLLDLEAQGSYLNIVEIAQDIGISLFIFLISYFSIGLIFKVTSKNLPPGPKGWPILGVLPHLGTMPHVTLANMAKKFGPIMYLKMGTCDTIVASSPNAARAFLKTLDHNFLNRPTIIGATHLGYNSQDLVFAKYGPKWKLLRKLTTLHMLGGKALQNWSNVREKEVKNMVRSIHEFGIKCEPIEIGDLLSCAITNMVSEVVLSKRIFANKGQESKEFKEMVVEFMTISGVNIGDFIPFIGWMDLGGVVSKMKCLHKKFDVFLTKMIEDHVKCAHERKEKPNFLDILMANGDDDDFGERLSLSNIKALLLNLFTAGTDTSSSIIEWALAEMLRNPHILLRAQKEIDQVVGKGRMLVESDLQKLPYLQAICKETYRLHPSTPLSVPRVSNKACQINGYYIPKDTRFNVNIWAIGRDPDIWANPLEFNPERFLSGKNARIDLNGVDFELIPFGAGRRICVGYRMAIVVIEYILGTLVHSFDWKLPIGVELNMDEAFGLTLQKAVPLSAMVIPRLVSNVYV 2182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01555 2182 SUPERFAMILY Cytochrome P450 1712 2175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 Gene3D Cytochrome P450 1705 2175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS P450 superfamily signature 2121 2132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS P450 superfamily signature 2112 2121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS P450 superfamily signature 1979 1996 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS P450 superfamily signature 2032 2043 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PANTHER - 16 1641 - -
Tsu03g01555 2182 Gene3D - 1437 1642 IPR027417 -
Tsu03g01555 2182 Pfam AAA domain 259 623 IPR041677 GO:0004386
Tsu03g01555 2182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1083 1641 IPR027417 -
Tsu03g01555 2182 ProSiteProfiles UvrD-like DNA helicase ATP-binding domain profile. 1084 1469 IPR014016 GO:0005524
Tsu03g01555 2182 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 2114 2123 IPR017972 GO:0005506|GO:0016705
Tsu03g01555 2182 Gene3D - 654 866 IPR027417 -
Tsu03g01555 2182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 254 852 IPR027417 -
Tsu03g01555 2182 Gene3D - 1090 1436 IPR027417 -
Tsu03g01555 2182 PANTHER MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 16 1641 IPR039904 -
Tsu03g01555 2182 Pfam AAA domain 632 829 IPR041679 -
Tsu03g01555 2182 Coils Coil 1624 1654 - -
Tsu03g01555 2182 Pfam Cytochrome P450 1712 2162 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 CDD SF1_C_Upf1 655 843 IPR041679 -
Tsu03g01555 2182 Pfam Domain of unknown function (DUF6469) 99 215 IPR045529 -
Tsu03g01555 2182 PRINTS E-class P450 group I signature 2111 2121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS E-class P450 group I signature 1857 1875 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS E-class P450 group I signature 2072 2096 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS E-class P450 group I signature 1968 1985 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS E-class P450 group I signature 2031 2049 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS E-class P450 group I signature 1739 1758 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS E-class P450 group I signature 1988 2014 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 PRINTS E-class P450 group I signature 2121 2144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01555 2182 CDD DEXXQc_Upf1-like 262 324 - -
Tsu03g01555 2182 Gene3D - 218 652 IPR027417 -
Tsu03g01555 2182 Pfam UvrD/REP helicase N-terminal domain 1087 1417 IPR014016 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01555 Tsu-Chr3 15398770 15412384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01555 1689 2181 Cytochrome P450 AT5G07990 46.850 3.37e-160 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01555 - - cam:101503364 2255.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03673 05 48089335 48099219 Tsu03g01555 03 15398770 15412384 PCT