Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01551 ATGAGACAATATATTTTGGATTCAGCACTTGCTGTTATTACTCTTTGTGTCTTCAGcagtttgtttaattttacacAAGCACAAACTCAAACTGCAGAAGCTACTACAGATCCTTATGAAGGTGGAGTTATAAATTCAATATTTACAAAATGGGGAATATCAGCGGATAaaaaacaatggaacattagcGGTGAGATATGTAGCGGAAGTGCCATTgataccaccaccaccattgaTGATAAACCTCATAATCCTTTCATCAAATGCGATTGTTCTTTCAACAATGAAACTACTTGCCGCATCACCGCACtGAAAGTTTATGCATTGGATGTGATTAGTCAAATTCCACCAGAGTTATGGACTCTAGTTCATCTCACCAATTTGAACCTTGCCCAGAATTACTTGACGGGGTCTCTACCTCCTGCGATTGGAAATCTGACTCGTATGCAATACATGACCTTTGGCATCAATGCTTTGTCAGGAGAGCTTCCAAAGGAATTGGGAAATCTTACACAATTGATTTCATTGGCTTTTGGGTCTAACAAGTTATCTGGGTCTTTGCCATCTGAACTTGGGAAGCTGGTAAAGCTACAACAACTCTACATGGACAGTTCTGGAATCAGCGGTCCAATTCCACGCACATTTGCAAGCCTTAAAAATTTGGGGACAGTATATGCTTCAGACAATAAACTCACTGGTAGAATACCCGACTTCATAGGAAATTGGTCTAAGCTTCAATCCTTGAGGTTTCAGGGTAATTCTTTCGAAGGTCCAATACCCTCatcattttccaatttgacTTCTTTGACAGAATTGAGAATAAGTGGTTTATCTAATGGTAGTTCCTCATTGAATGTATTAGGGAACATGAAGTCTATGACAATCTTAGAATTAAGAAATAACAATATTTCTGGTTCAATTCCTTCCTCCATAGGAGAACTTCAAAATTTGACCTTGCTGGACTTAAGCTTCAATAAAATCTCAGGAAAAATACATGgatcaattttcaatttgagTTCACTCTCTTACTTGTTTCTCGGAAATAACACACTTAGTGGCACTCTCCCTCAACAGAAAAGTTCAGTTCTTAAAAGCATCGACTTGTCATACAATGATCTATCAGGGAGTCTCCCCTCTTGGATAAACGAACATGATTTACAACTGAACATAGTTGCCAACAACCTGTCGATAGTAAATTCGAATACCAGTGGTTTGCCTACTGGGCTCAACTGTCTCCAGAAAAATTTCCCATGCAATCATGGTGCTGCAAGATATTCTGACTTTGCAATCAAATGTGGTGGTACACAAATTAGAACTACAGAAGGAGTTGTGTATCAGGCGGACAACGAGTCACTTGGTCCTGCTACATACTTTGTTACTGATACAAATAGATGGGCTGTTAGTAATGTTGGAACATTTACTGGGAGCAGCAATCCTCTGTTTCAAAGTTTTCTTTTACATCAGTTCACTCAAACTATGAACCCAGAGATTTTTCAAACTGCTCGGCTCTCTCCATCATCATTAAGATATTATGGTCTTGGgttagaaaatggtttttacAACATTACCCTCCAATTTGCGGAAACAGCTATTCTGGATTCCACCACATGGAAAAGCCTCGGGAAACGAGTCTTTGATATTTATATCCAGGGGACTCGTGTTTTGAAGGATTTTGACATACAAAGAGAAGCTGGGGGTGTGTCTTTTAGAGCTGTTCAAAAGCAATTTAGGTTTGAGGTGAAAGAAAACTATCTTGAGGTCCATCTTTTTTGGGCCGGAAAAGGGACTTGTTGCATACCTACCCAAGGTACTTATGGGCCCTTGATTCAAGCCATCAGTGCTACCCCAgATTTCATACCTACTGTCAGCAATAAACCTCCCAGCACTAAAAAGAATAGAACGGGTCTAATCATCGGAGTTGTTCTGGGTGTTGGAGCTATTTTCTTTCTAGCAGTTTTTGCCATTTTCTATATCATTCGAAGAAAACAATATGATGACGATGATGAGCTTTTAGGCATTGATACAATGCCTAACACTTTTAGctattatgaattaaaaaacgCTACAAGTGACTTCAATCGCGACAATAAACTTGGAGAGGGGGGTTTTGGACCTGTTTATAAGGGGACACTTAATGATGGAAGAATTGTGGCTGTAAAACAATTATCTATAGGATCCCATCAAGGAAAGAGTCAGTTTGTAGCTGAGATTGCTACTATATCTGCTGTGCAACACCGTAATCTTGTCAAATTATATGGATGTTGTATTGAAGGGAGTAAAAGACTTCTTGTCTACGAGTATTTAGAAAATAAGAGTCTTGATCAAGCATTGTTTGGAAATGTTTTATTCCTCAATTGGTCAACCCGCTATGATATTTGCATGGGTGTTGCAAGAGGTTTGACATATTTACATGAGGAGTCACGGCTCCGGATTGTGCACCGCGATGTGAAAGCTAGTAATATTCTACTCGACTCTGAGCTTGTCCCAAAAATATCTGATTTTGGATTGGCCAAATtatatgatgataaaaaaacGCATATAAGCACCCGTGTTGCTGGGACGATTGGATATCTAGCACCGGAGTATGCAATGCGTGGACACCTCACAGAGAAAGCGGATGTTTTTTCCTTTGGTGTTGTGGCTCTCGAGTTAGTTAGTGGGAGGCCAAATTCTGATTCAAGCTTAGAAGGAGAAAAGATGTATCTTCTAGAATGGgcTTGGCAGCTTCATGAAAGGAACTGTATAAATGATCTGATAGATTCTAGACTATCAGAATTCAACGCGGAAGAAGTCCAACGCCTTGTGAAAATAGGACTTTTGTGCACACAGACATCACCAAACTTACGGCCATCAATGTCACGTGTAGTGGCAATGCTTTCAGGGGATATTGAAGTGAGTGCTGTAACATCAAGGCCCGGATACTTGACTGACTGGAAATTTGACGATGTTAGCAGCGTCATGACTAATATTTCAACGAGAGGATTGGATACAAGTTATTACAATTCATCAGCAAGTCCTAGCATAGTTGGTGGTGCATATATTCGTTCACCAATTGATCCATCTAAATCCATCCTTCAAGAGACTGTTAACGATGGTAGGTAA 3102 0.381 MRQYILDSALAVITLCVFSSLFNFTQAQTQTAEATTDPYEGGVINSIFTKWGISADKKQWNISGEICSGSAIDTTTTIDDKPHNPFIKCDCSFNNETTCRITALKVYALDVISQIPPELWTLVHLTNLNLAQNYLTGSLPPAIGNLTRMQYMTFGINALSGELPKELGNLTQLISLAFGSNKLSGSLPSELGKLVKLQQLYMDSSGISGPIPRTFASLKNLGTVYASDNKLTGRIPDFIGNWSKLQSLRFQGNSFEGPIPSSFSNLTSLTELRISGLSNGSSSLNVLGNMKSMTILELRNNNISGSIPSSIGELQNLTLLDLSFNKISGKIHGSIFNLSSLSYLFLGNNTLSGTLPQQKSSVLKSIDLSYNDLSGSLPSWINEHDLQLNIVANNLSIVNSNTSGLPTGLNCLQKNFPCNHGAARYSDFAIKCGGTQIRTTEGVVYQADNESLGPATYFVTDTNRWAVSNVGTFTGSSNPLFQSFLLHQFTQTMNPEIFQTARLSPSSLRYYGLGLENGFYNITLQFAETAILDSTTWKSLGKRVFDIYIQGTRVLKDFDIQREAGGVSFRAVQKQFRFEVKENYLEVHLFWAGKGTCCIPTQGTYGPLIQAISATPDFIPTVSNKPPSTKKNRTGLIIGVVLGVGAIFFLAVFAIFYIIRRKQYDDDDELLGIDTMPNTFSYYELKNATSDFNRDNKLGEGGFGPVYKGTLNDGRIVAVKQLSIGSHQGKSQFVAEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFGNVLFLNWSTRYDICMGVARGLTYLHEESRLRIVHRDVKASNILLDSELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNSDSSLEGEKMYLLEWAWQLHERNCINDLIDSRLSEFNAEEVQRLVKIGLLCTQTSPNLRPSMSRVVAMLSGDIEVSAVTSRPGYLTDWKFDDVSSVMTNISTRGLDTSYYNSSASPSIVGGAYIRSPIDPSKSILQETVNDGR 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01551 1033 Pfam Malectin domain 427 612 IPR021720 -
Tsu03g01551 1033 Gene3D - 427 616 - -
Tsu03g01551 1033 CDD STKc_IRAK 698 959 - -
Tsu03g01551 1033 SUPERFAMILY Protein kinase-like (PK-like) 675 987 IPR011009 -
Tsu03g01551 1033 Pfam Protein tyrosine and serine/threonine kinase 695 959 IPR001245 GO:0004672|GO:0006468
Tsu03g01551 1033 SMART serkin_6 692 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01551 1033 Gene3D Phosphorylase Kinase; domain 1 663 767 - -
Tsu03g01551 1033 SUPERFAMILY L domain-like 91 394 - -
Tsu03g01551 1033 ProSiteProfiles Protein kinase domain profile. 692 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01551 1033 Gene3D Transferase(Phosphotransferase) domain 1 768 970 - -
Tsu03g01551 1033 Gene3D Ribonuclease Inhibitor 282 396 IPR032675 -
Tsu03g01551 1033 Gene3D Ribonuclease Inhibitor 204 281 IPR032675 -
Tsu03g01551 1033 Pfam Leucine rich repeat 292 351 IPR001611 GO:0005515
Tsu03g01551 1033 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 105 1009 - -
Tsu03g01551 1033 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 105 1009 - -
Tsu03g01551 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Tsu03g01551 1033 Gene3D Ribonuclease Inhibitor 57 203 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01551 Tsu-Chr3 15310239 15356010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01551 106 279 Receptor kinase-like Gene Family AT1G56120 24.713 3.73e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu03g01551 PK_Tyr_Ser-Thr 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01551 - - mtr:MTR_8g445800 1645.56