Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01537 ATGTCCTTTAAGATGAACTGGTTAGAGAGGAATGCTGCATCACAGACTATTTGGTCACTCCCCCCTTCATTTGCCGTAGAGGTATATTGTGGTGTGACAATTGAAGAGCTCATAGAAAAGTATGGGAAGAACTGGATGCCCCATTTCGAGAACCTTAAATATTGGCAAGTTATCACCAAAATGCTACAAGCAAATAACTATCCACCAGAGTTTCTACGTGAAGTGGACAAAGACAATTGGGATATGGCTGACCCTGTAGGACTTGTTTCCGAAGGATTTTGTCAGCACTCTGCGGTGTGGGTCTTACAATGGCTATCAATGGGTTCTTCCTTTACACCAAACATTCATGTCATGCTGAAAGAAGATGTTGTTAGAATGAAGGCGGCGATGGATTTGTTATTGGAAGATATCAGTGTACTGCTCCTTGCTGGTTTCGCCGGTTTAGTAGTCGGTGCTTGTAGCATGGCAATCGGTGAGTTTGTTTCTGTTTATACTCAATATGATATTGATATAGCAcaaattaaaagagaaagagaattagcaaataataataatgatgaagaAAGTAGTGAAAGAGAGAAATTGCCAAATTCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCACTAATGTCATTGCTAGCAGCTGCATTCATAAAGAATTATAAGATTAGAATGGgtgttgttgctgctgttgtGAGTTTTGCATTGTTAGTGTTTGGATCGGTGGGAGCATTGATTGGAAAAACTCCAGTTATGAGGTCTTGTGTTAGAGTTCTCATTGGTGGTTGGATGGCTATGGTTATTACTTTTGGTGTCACCAAATTGATTGGCACTACTGgactttga 861 0.374 MSFKMNWLERNAASQTIWSLPPSFAVEVYCGVTIEELIEKYGKNWMPHFENLKYWQVITKMLQANNYPPEFLREVDKDNWDMADPVGLVSEGFCQHSAVWVLQWLSMGSSFTPNIHVMLKEDVVRMKAAMDLLLEDISVLLLAGFAGLVVGACSMAIGEFVSVYTQYDIDIAQIKRERELANNNNDEESSEREKLPNSFQAALASALAFSVGALMSLLAAAFIKNYKIRMGVVAAVVSFALLVFGSVGALIGKTPVMRSCVRVLIGGWMAMVITFGVTKLIGTTGL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01537 286 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 129 283 - -
Tsu03g01537 286 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 129 283 IPR008217 GO:0005384|GO:0030026
Tsu03g01537 286 Coils Coil 171 191 - -
Tsu03g01537 286 Pfam VIT family 190 278 IPR008217 GO:0005384|GO:0030026
Tsu03g01537 286 Pfam VIT family 135 188 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01537 Tsu-Chr3 15137048 15141726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01537 135 286 Nodulin-like Gene Family AT3G43660 59.868 4.95e-61 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01537 K22736 - gmx:100790996 213.386