Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01465 ATGTTGTTGTTTTCTGATTCAATGTTGAAATTCAATCTCTTTCATGTTTTCACTCATACAACACTTCACTCTACGGTAACTGTAACTGTTCATTGTCGCAATCATTTTTCTGATTTATCTGTTTCCAACACAAATCAAGATGACTCATTTAACCTATTAAGTATCTTAAACTCATCTGGGTTGTCCTCTGAAAATGCCATTAAACTCAAAAAAAGGTTGAAAATCAGAAACCCTGATAATGGCCCAGATGCTGTAGTTCAACTTCTAAGAACCTATGGCTTCTCTGATTCCCAATTATCAACCCTTGTTAAGAAACGTCCTTCTGTGCTTTTATCAGATGCTGAAAAGACCCTTTTGCCCAAACTCAAGTTTTTGCAATCCATTGGGGTTTCAAACACTGATCTCCCCAAAATTGTAATTGGGAATACTATCTTTTTATCAAGTTTGGAGAAAAATATTATACCTCGTTATCACATTATTAGGAGCATTGTTCGCGATGACAAAGAGGTAGTTTCAGTTTTTAAGCGTGGGACGTGGAACTTTTACAGTGATTCCATGGTTCCAAACATTGAGGTTTTGAGGAATCATGGTGTGCCTCAAACTTCCATTTCTCATTTGGTATGCAATTATTCCGCTGTAGCATTCGTCGATCATTCTATATTTGTTGAGGCTGTTAATTCAGTTAAGGATATGGGTCTTTCCCCAGAAGACATTGCTAGAAGCCCTAATATTCTGAACCGCAACTTGGAGAAGACAATAATGCCTAGATGTGCAGTTGTTAACATTTTGAAGTCAAGGGGTTTGATAAAGAGTGATTTGCTCATAGGTCAGAAGTTAGATTGA 843 0.3689 MLLFSDSMLKFNLFHVFTHTTLHSTVTVTVHCRNHFSDLSVSNTNQDDSFNLLSILNSSGLSSENAIKLKKRLKIRNPDNGPDAVVQLLRTYGFSDSQLSTLVKKRPSVLLSDAEKTLLPKLKFLQSIGVSNTDLPKIVIGNTIFLSSLEKNIIPRYHIIRSIVRDDKEVVSVFKRGTWNFYSDSMVPNIEVLRNHGVPQTSISHLVCNYSAVAFVDHSIFVEAVNSVKDMGLSPEDIARSPNILNRNLEKTIMPRCAVVNILKSRGLIKSDLLIGQKLD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01465 280 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 228 277 - -
Tsu03g01465 280 Gene3D Transcription termination factor 3, mitochondrial 44 274 IPR038538 -
Tsu03g01465 280 PANTHER CGI-12 PROTEIN-RELATED 228 277 IPR003690 GO:0003690|GO:0006355
Tsu03g01465 280 SMART mt_12 235 269 IPR003690 GO:0003690|GO:0006355
Tsu03g01465 280 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Tsu03g01465 280 SMART mt_12 136 166 IPR003690 GO:0003690|GO:0006355
Tsu03g01465 280 PANTHER CGI-12 PROTEIN-RELATED 25 236 IPR003690 GO:0003690|GO:0006355
Tsu03g01465 280 Pfam mTERF 86 200 IPR003690 GO:0003690|GO:0006355
Tsu03g01465 280 Pfam mTERF 144 270 IPR003690 GO:0003690|GO:0006355
Tsu03g01465 280 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 25 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01465 Tsu-Chr3 14286873 14288018 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu03g01465 mTERF 9.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01465 K15032 - gmx:106799612 194.126