Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01464 ATGTTTCTAAGCATCATTAACTCATCTGGGTTGTCCCCTGAAAAAGTCCTTAAACTCAAAAATAGGTTGAAACTCAGAAAATATGATGATGGCCCAAATGTTGTTATTCAACTTTTCAGAAACTATGGCTTCTCTGATTCCCAATTATCGAGGCTTGTTAAGAAACACCCTTTTGTGCTTTTATCAAAACCTGAAAATACCCTTTTGccaaaacttaagtttttgcAATCCATTGGGGTTTCAATCACTGATCTCCCCAAAATCCTAATTGGTAACATTCCCCTTTTAACTACAAGTTTGGAGAAAAATCTTATACctcgttataatgttattagGAGCCTTGTTCGTAATGATAAAGAGGTTGTTTCAGCTTTGAAGCATTGGTCATGGACCTTTTACAATGATTCCATGGTAAATGATTCTGTTCCAAACATTGAGGTTTTGAGGAATCATGGTGTGCCTCAAACTTCCATTTCTCATTTGGAATGCAATTATTCCGCTGTAGCATTCGTCGATCATTCTATATTTGTTGATGCTGTTAATTTAGTCGAGGTAATGGGGTTCGATCCTCTGAAGTCGAATTTTGTTTTGGCACTTCAAGTATTTGTTAagataaagaaagaaatttgGGAGTCAAGATTGAAGTTATTTGATGGGTGGGGCTGGTCGAAAGATATATGTGTTTCGGCTTTCCAAAGATATCCTCAGTATATATTGATCTCAGAAAAAAAGGTTATGAAAACAATGAACTTCTTGGTGAAGGATATGGGTCTTTCCCCAGAAGACATTGCTAGAAACCCTAATATTCTGAACCGCAACTTGGAGAAGACCATAATGCCTAGATGTGCAGTTGTTAAGATTTTGAAGTCAAGGGGTTTGATAAAGAGTGATTTGCTCATAGGGAGTTGGAATTTAATTTGGCGCATCAAAGCACTGCCAAAGATAAAAAAATCTGGTGTGTTGAGTATGTCGGAACTGCCTTCCGATGAGGAAAAGACTGCAGGAGCTAGTATTGCTTGTTGGCAAAAGTGTGGATTGTGGCAAACAATATATGCTGCAATTAATAGACAACAAAGCACAGCTACCGTTTGTTTTGATGTTTTGCATAATGTCAATGTTCAACAAGCTGTTATGTTTGCAACTTTGATGTGA 1152 0.3576 MFLSIINSSGLSPEKVLKLKNRLKLRKYDDGPNVVIQLFRNYGFSDSQLSRLVKKHPFVLLSKPENTLLPKLKFLQSIGVSITDLPKILIGNIPLLTTSLEKNLIPRYNVIRSLVRNDKEVVSALKHWSWTFYNDSMVNDSVPNIEVLRNHGVPQTSISHLECNYSAVAFVDHSIFVDAVNLVEVMGFDPLKSNFVLALQVFVKIKKEIWESRLKLFDGWGWSKDICVSAFQRYPQYILISEKKVMKTMNFLVKDMGLSPEDIARNPNILNRNLEKTIMPRCAVVKILKSRGLIKSDLLIGSWNLIWRIKALPKIKKSGVLSMSELPSDEEKTAGASIACWQKCGLWQTIYAAINRQQSTATVCFDVLHNVNVQQAVMFATLM 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01464 383 PANTHER CGI-12 PROTEIN-RELATED 5 303 IPR003690 GO:0003690|GO:0006355
Tsu03g01464 383 Pfam mTERF 36 188 IPR003690 GO:0003690|GO:0006355
Tsu03g01464 383 Pfam mTERF 202 295 IPR003690 GO:0003690|GO:0006355
Tsu03g01464 383 Gene3D Transcription termination factor 3, mitochondrial 95 325 IPR038538 -
Tsu03g01464 383 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 5 303 - -
Tsu03g01464 383 SMART mt_12 50 81 IPR003690 GO:0003690|GO:0006355
Tsu03g01464 383 SMART mt_12 228 259 IPR003690 GO:0003690|GO:0006355
Tsu03g01464 383 SMART mt_12 86 117 IPR003690 GO:0003690|GO:0006355
Tsu03g01464 383 SMART mt_12 260 294 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01464 Tsu-Chr3 14281339 14285366 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu03g01464 mTERF 3.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01464 K15032 - gmx:106799612 339.732