Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01459 atggatgatAATTTCATTGTGAGTGTGACAAATGAAGAGGTGGTGGCAGCAGTGTTACCAATACAAGAACATTGGCTTCCACTCTCTAATCTTGACTTACTTCTACCTAAAGTTGATGTTGGAGTGTTCTTTTGTTACAAGAATCCTATGTTATTGTCTACTTCTACAACATTATTAACCTTTGAATCTATGGTTGTGTCTCTCAAGAAGGCATTAGCTAAGGTTTTGGTCTCTTATTATGCTTTTGCAGGTGAAGTTGTGTCTAATTCTGTGGGTGAACCTGAGCTTCTTTGTAATAATCGTGGggttgattttgttgaagctgtGGCTGATGTTGAGCTTCAATGCATTAACTTTTATAATCCTGATGAATCTGTTGAAGGAAAGTTTGTTCCAAAGAAGAAGCACGGCGTGCTCGCTATTCAGGCAACTTCATTAAAATGTGGTGGGATAGTAGTGGCATGCACATTTGATCATCGTATAGCAGATGCCTATTCAGCAAACATGTTTCTAGTATCATGGGCCGAGATGGCCCACTCAACAAAGCCCATCAAGCCTAAAACCATAACAACCATAAACAATCCATGTTTCCGTCGCTCCCTCCTCAGCCCTCGCCATCCCGGTTCTATCCACCCTTCTCTCGATGACATGTACATTCCCATTTCCAGACTTTCCCCTCCTTCGGCCACTGCTACCAAGCCGCTACTTAGTCGAATATACCATGTCACCGCAGAGGAGCTCCAACGTTTGCAATCACTTGCCGTTGCGACCAACGATGGCAACACCAAGCCTACAAAACTTGAATCTTTCTCTGCCTATTTGTGGAAGTTGGTTGCTCATGCGGCTACAAGGGACGGTGGTAAAATGGTCATTGCCAAAATGGGTATAGTGGTTGATGGAAGAAAAAGACTTGGCAATAATAGTAGTGACGAGAAAGGGAAAGAAGCAATGATGGAACGATATTTTGGGAATGTTCTTTCTATACCCTTTGGCGGGAAACCGGTGGAGGAGTTGGTGGATAAGCCATTAGGGTGGGTGGTTGATGAGGTCCGCGAGTTTGTATCAGTAGCAACAACGGAGGAGCACTTTTTGGGGCTCATCGATTGGGTGGAAGAGAATCGACCTATTCCTGGATTGGCGAAAATTTATTGTGGTTTCCCCAATGAGGGACCAACTTTTGTGGTGTCTTCCGGACAAAGATTTCCGGAAGACAAGGTCAGTTTTGGGTGGGGAAAAGTTGTGTTTGCATCTTACCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTGATGCCAATGCCAAGCCCTTTAAGGAATGGTGATTGGATTGTTTACATGCACCTTTTGAAAGAGCAATTGGAGATCATAGAGTCCGAGGCAAATCATGTGTTTAGACCTATAACTTGGGATTATCTCAATCAATGA 1422 0.429 MDDNFIVSVTNEEVVAAVLPIQEHWLPLSNLDLLLPKVDVGVFFCYKNPMLLSTSTTLLTFESMVVSLKKALAKVLVSYYAFAGEVVSNSVGEPELLCNNRGVDFVEAVADVELQCINFYNPDESVEGKFVPKKKHGVLAIQATSLKCGGIVVACTFDHRIADAYSANMFLVSWAEMAHSTKPIKPKTITTINNPCFRRSLLSPRHPGSIHPSLDDMYIPISRLSPPSATATKPLLSRIYHVTAEELQRLQSLAVATNDGNTKPTKLESFSAYLWKLVAHAATRDGGKMVIAKMGIVVDGRKRLGNNSSDEKGKEAMMERYFGNVLSIPFGGKPVEELVDKPLGWVVDEVREFVSVATTEEHFLGLIDWVEENRPIPGLAKIYCGFPNEGPTFVVSSGQRFPEDKVSFGWGKVVFASYHFPWGGEAGYVMPMPSPLRNGDWIVYMHLLKEQLEIIESEANHVFRPITWDYLNQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01459 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 468 - -
Tsu03g01459 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 468 - -
Tsu03g01459 473 Gene3D - 222 458 IPR023213 -
Tsu03g01459 473 Pfam Transferase family 7 461 - -
Tsu03g01459 473 Gene3D - 6 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01459 Tsu-Chr3 14253967 14256810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01459 16 456 Monolignol Biosynthesis Gene Families AT5G48930 25.597 1.25e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01459 - - gmx:100785067 681.404