Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01368 ATGGTAACCATTACAGCTTCTCACACTGTGATTCCAGAAGAACCAACTCCACAAGGTCGTTTATGGCTTTCCGATATAGACCAAGTGGTTCGTCTCCGTCACACACCAACTCTTTATgtttacaaaccaaaacagaacACTGAAAAAGCCATAGAAACTTTGAAGAACTCTCTTAGTAAAATTCTTGTTCACTACTACCCTGTAGCTGGTAGAGTGTGTTACACGGAAGGTGGTCGATTAGAACTGAATCTTAATGCAGAAGGAGCTGTTTTGATAGAAGCTGAAACAGAAAAAACAATGAATTATTATGGTGACTTTTCACCTTCTGATTCCACCAAAGAGCTTGTTCCAATAATTGATTACAATCAACCAATTGAAGAACTTCCAATTTTTGTTGTTCAACTCACAAGGTTCCAAAACAATGAAGGTTTAGCAATTGGTATTGCTTTTAATCACCTTTTATGTGATGGATTTGGAGCCATTAAATTCATCAACTCATGGGCCAAAGTAGCAAGAGGAGAAACACTTGAGGCTAATGAGTTACCATTTTTGGATAGAACAGTTCTCAAATTTTCACACACCCCTTTGAAGCCACGTTTTGAACACATGGAGTTGAAGCCATTACCACTCATTCTAGGAAGAGAAGAtacaagtgaagaaagaaagaagaaaacttcAGCAACAATGTTGAAACTTTCATCAGAACAAGTTGATAAGTTGAAGAAAAAAGCCAATGAAGACGGCGTTTTAGCTACGAAGAAAAAAGAGTCAAGGCCATATAGTAGATATGAAGCAATTGGTGCACATATATGGAGAAGTGCTTCTAAGGCACGTGAGCTTGAAGAGAATCAAGAAAGTGTTGTTAGATTCAATGCTGATATTAGAACTAGATTGATTCCACCACTTCCTATAAGCTATTTTGGGAATGCTTTGACTCAAACTGCTACAAAAGGTTATATTGGAGAAATCACATCAAAGCCTTTAGGTTATGTAGCACAGAAGATAAGGGAAGCAACTGAGTTAGTAAGTGATGAGTTCATAAGGTCACAAATTGATGTTATTAGAAGTTTTGAACATTTGGATGATgcaagaaaattgtttttaaatgcTGAAGGTGAAATTGCTCCATATTTTGGTAatccaaattttcatttaacaAGTTGGATGAGTATGCCTTTTTATGAAGCTGATTTTGGATGGGGGAAGCCATTTTACTTTGGATTAGCTTATGTATCTCCACATGATAGAGCATTGATTCTTCTTAGTCCTGATGGAGATGGATCTGTTCTTGTGTGTTTGCATTTTCAGATTGCACATTTGGAGCTTTTCAACAAGTTCTTCTATGGGGATATATGa 1356 0.3473 MVTITASHTVIPEEPTPQGRLWLSDIDQVVRLRHTPTLYVYKPKQNTEKAIETLKNSLSKILVHYYPVAGRVCYTEGGRLELNLNAEGAVLIEAETEKTMNYYGDFSPSDSTKELVPIIDYNQPIEELPIFVVQLTRFQNNEGLAIGIAFNHLLCDGFGAIKFINSWAKVARGETLEANELPFLDRTVLKFSHTPLKPRFEHMELKPLPLILGREDTSEERKKKTSATMLKLSSEQVDKLKKKANEDGVLATKKKESRPYSRYEAIGAHIWRSASKARELEENQESVVRFNADIRTRLIPPLPISYFGNALTQTATKGYIGEITSKPLGYVAQKIREATELVSDEFIRSQIDVIRSFEHLDDARKLFLNAEGEIAPYFGNPNFHLTSWMSMPFYEADFGWGKPFYFGLAYVSPHDRALILLSPDGDGSVLVCLHFQIAHLELFNKFFYGDI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01368 451 Pfam Transferase family 1 447 - -
Tsu03g01368 451 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 451 - -
Tsu03g01368 451 Gene3D - 1 207 IPR023213 -
Tsu03g01368 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 451 - -
Tsu03g01368 451 Gene3D - 213 448 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01368 Tsu-Chr3 13104856 13106336 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01368 2 448 Monolignol Biosynthesis Gene Families AT5G48930 34.598 9.01e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01368 K13065 - gmx:100778626 572.392