Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01364 ATGGCAACCATAAAAGCTTCTTACACTTTGACACCCAATGAATCAACTCCAAAGGGCCATAATAGATCAAGTTCTGGTCGTTATTGTTTCACGAAAGGCGGTCGTATAGAATTGAATCTCAATGCAAAAGGAGCTGTTTTGATAGAAGCTGAAACCACTAAAACAATTTATGATTATGGTGACTTTTCACCTTCTGACTCTACCAAAGAGCTTATTccaaaaattgattataatcAACCAATTGATGAAATTCCACTCTTTGTTGCTCAAGTAACAAGATTTCAAAACAAAGATGAAAGTTTTGGATTTGCAATTGGAATTGCTTATTCACATCCTTTATCTGATGGGGTTGGTTGTTTCAACTTGTTGAACTCATGGGCCAAAATAGCAAGAGGCGAAACACTTGAGGATAATGAATTACCATTTTTGGATAGAAGAATTCTCAAATTTTCACACACCCCAATTGAGCCGCGCTTTGAACACATAGAATTGAAGCCGTTGCCATACATTCTAGGAAGATCTGACAATGATAtcgaaagaaagaagaaaaccaCAGCTGAATTGTTGAAACTCACAgtagaagaagttgaaaagttgaagaaaaaggcTAATGAAGGTGATATTTCAAAAGCGTCAAGACCTTATAGTAGATTTGAAGCAATTTGTGCACATATTTGGAAAAGTGCTTCGAAGACTCGCGAGCTTAGTGAGAATCAACCAAGTGTTGTTAGGTTCAATGTTGAAATCAGGAATAGAATAATTCCAAACCTTCCTATGAATTATTATGGGAATGCTTTGATCCAAACAGCAGCAACAAGTTACATTGGAGAAATCAAACCAAAGCCATTGAGTTATGTTGCACAAAGGATAAGGGAAGCACATGAGTTGATATCAAATGAGTATATAAGGTCACAAATTGATGTTATTAGAAGTTTTGAGAATTTGGAGAAATGCAAGGAAATTGTTTATAGGTGGAGAAGGTAA 984 0.3354 MATIKASYTLTPNESTPKGHNRSSSGRYCFTKGGRIELNLNAKGAVLIEAETTKTIYDYGDFSPSDSTKELIPKIDYNQPIDEIPLFVAQVTRFQNKDESFGFAIGIAYSHPLSDGVGCFNLLNSWAKIARGETLEDNELPFLDRRILKFSHTPIEPRFEHIELKPLPYILGRSDNDIERKKKTTAELLKLTVEEVEKLKKKANEGDISKASRPYSRFEAICAHIWKSASKTRELSENQPSVVRFNVEIRNRIIPNLPMNYYGNALIQTAATSYIGEIKPKPLSYVAQRIREAHELISNEYIRSQIDVIRSFENLEKCKEIVYRWRR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01364 327 Gene3D - 19 166 IPR023213 -
Tsu03g01364 327 Pfam Transferase family 26 310 - -
Tsu03g01364 327 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 320 - -
Tsu03g01364 327 Gene3D - 173 326 IPR023213 -
Tsu03g01364 327 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 25 320 - -
Tsu03g01364 327 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01364 Tsu-Chr3 13080182 13081276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01364 25 309 Monolignol Biosynthesis Gene Families AT5G48930 31.930 1.00e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01364 K13065 - gmx:100778626 328.946