Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01363 ATGAGCAACGCCCACAACATCAGCCAACAACACAAGACTGAGTTGAAGAGGACAACTATTTCAAATCTTCAAAGTATCATTGGAGAAAGTCTAGTCTTCGCAAGTCGTTATTGTTACAAAGAAGGTGGTCGATTAGAATTGATTCTCAATGCAAAAGGAGCTGTTTTGATAGAAGCTGAAACCACTAAAACAATTTATGATTATGGTGACTTTTCACCTTCTGAATCTACCAAAGAGCTTATTCCGAAAATCCATTATGATCGACCAATTGAAGAAATTCCATTGTTTGTTGCTCAAGTAACAAGATTTCAAAACAAAGATGAAAGTTTTGGATTTGCAATTGGAATTGCTTATTCACATCCTTTATCTGATGGGGTTGgttgttttaatttgttgaacTCGTGGGCCAAAATTTCAAGAGGTGAAACACCTGAGGATAATGAATTACCATTTTTAGATAGAACAATTCTCAAATTTTCACACACCCCAATTGAACCGCGGTTCGAACACATAGAATTGAAGCCGTTGCCACTCATTGTTGGAAGATCTGACAATGAtattgaaagaaagaagaaaacaacAGCTGAATTGCTGAAACTCACAgtagaagaagttgaaaagttgaagaaaaaggcTAATGAAGGTGATATTCCAAAAGGGTCAAGACCTTATAGTAGATTTGAAGCAATTACTGCACATATTTGGAAAAGTGCTTCGAAGGCACGCGAGCTTAGTGAGAATCAACCAAGTGTTGTTAGGTTCAGTGCTGGAATCAGGGATAGAATAATTCCAAATCTTCCTAAGAATTATTATGGGAATGCTTTGATCCAAACAGCAGCAACAAGTTACATTGGAGAAATCAAATCAAAGCCATTGAGTTATGTTGCACAAAGGATAAGGGAAGGGAATGAGTTGATAACAAATGAGTATATAAGGTCACAAATAGATATTATTAGAGGATTTCAACATTTGGATGATGCAAGGAAATTGTTTTTAGGTGTTGAAGGTAAGAATGCTGCATATTTTGTTGGGAATCCTAATCTTCACATAACAAGTTGGATGACTATGCCTGCATATGAAGCTGATTTTGGGTGGGGAAAGCCTTTTCATATTGGTATGGGATCTGTGACTCCATTTGATAAGGGATTGATTCTTATGAGTCCTGATGGAGATGGTTCTGTTATTGTTTGTATGCATTTTCAGGTTGAACTTATGCAGCTTTTCAAAAAGTTCTTCTATGgagaaatcaaatcaaacctGTAA 1263 0.3405 MSNAHNISQQHKTELKRTTISNLQSIIGESLVFASRYCYKEGGRLELILNAKGAVLIEAETTKTIYDYGDFSPSESTKELIPKIHYDRPIEEIPLFVAQVTRFQNKDESFGFAIGIAYSHPLSDGVGCFNLLNSWAKISRGETPEDNELPFLDRTILKFSHTPIEPRFEHIELKPLPLIVGRSDNDIERKKKTTAELLKLTVEEVEKLKKKANEGDIPKGSRPYSRFEAITAHIWKSASKARELSENQPSVVRFSAGIRDRIIPNLPKNYYGNALIQTAATSYIGEIKSKPLSYVAQRIREGNELITNEYIRSQIDIIRGFQHLDDARKLFLGVEGKNAAYFVGNPNLHITSWMTMPAYEADFGWGKPFHIGMGSVTPFDKGLILMSPDGDGSVIVCMHFQVELMQLFKKFFYGEIKSNL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01363 420 Gene3D - 182 414 IPR023213 -
Tsu03g01363 420 Gene3D - 5 175 IPR023213 -
Tsu03g01363 420 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 29 416 - -
Tsu03g01363 420 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 29 416 - -
Tsu03g01363 420 Pfam Transferase family 33 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01363 Tsu-Chr3 13071511 13074186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01363 33 413 Monolignol Biosynthesis Gene Families AT5G48930 32.546 3.31e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01363 K13065 - gmx:100778626 442.195