Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01292 ATGGTTGAGTTGGATATTCAGATCCCATCGACATTTGATCCATTCGCTGAAGCCAAAGAATCGGATGCAACTGGAGCGAAAGCTTATGTTCATATACGCATTCAACAAAGGAATGGAAAAAAGAGCTTAACAACTGTTCAAGGGCTGAAGAAAGAGTTCAGCTACGAGAAGGTTCTAAAAGATCTTAAGAAAGAGTTCTGTTGCAACGGTAATGTAGTGCAGGATAAAGAACTTGGCAAAATTATTCAACTTCAAGGTGATCAACGCAAGAACGTTTCTCAGTTTTTGGTTAAGGCTAGACTTGTGATGAAGGATCAGATTAAGATTCATGGTTTTTGA 339 0.3864 MVELDIQIPSTFDPFAEAKESDATGAKAYVHIRIQQRNGKKSLTTVQGLKKEFSYEKVLKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVKARLVMKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01292 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Tsu03g01292 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Tsu03g01292 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - -
Tsu03g01292 112 Gene3D - 1 112 - -
Tsu03g01292 112 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Tsu03g01292 112 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 1 112 - -
Tsu03g01292 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Tsu03g01292 112 Pfam Translation initiation factor SUI1 27 99 IPR001950 GO:0003743|GO:0006413
Tsu03g01292 112 CDD eIF1_SUI1 29 111 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01292 Tsu-Chr3 12369161 12369499 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01292 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 83.929 1.49e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01292 K03113 - cpap:110820651 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01292 03 12369161 12369499 Tsu05g03861 05 49680942 49688104 PCT