Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01291 ATGTCTCATGAGGTTCAAGTAACTAATAATGGTGTGCAATCAAATGATCAAGAGGGCGAAACACcacaattttgcattcaaggtGGCTTGAAAACAATTAACTTGAGGGAAGAAGTTGTATCCGCACCGGTTGCGAAAACGCCAAAACAAAGATTTCAACCAAAAGAGGATGAAATTATCATTCAATCATGGCTCAACGTTTCAAAGGATCCAATTGTTGGAGTTGATCAAAAAGGAGATAGTTTTTGGAAGAGGGTTGGTGACGCTTATAACAAGCATCGCgacaaaaattacaaagaaaggaAACCGATGGAAATAAAAGATGAACATAAAAAGTTCACATTTGAAGATCCTTGGAGATTATTGAAAGATGAACCTAAATGGCTTGCGGGTATATCGGAACCTTCCGCAAAAAGAACAAAGAATTCAGCTTCAGGAGCATATTTATCATCTTCTAACCAGCCGACACCAACAGGCAACAAATATAATCCACCATCACCTATTTCGCTACGTCGTCCAATGGGTCAAAAGGCGGCCAAAAGGAAGGAGAAAGAAAAGCTTGTCAAAAAGTCTATTCCTTTGGGAAAAATTGATGATTTGCAAGATGACATAAAACAAAAAGTTCACATAATGTCGGAGTTTTCACGTAATTGGACACGTATTGAGGAAGAAAAACTTGAGATGGAGAAGGAAAGGTTGAAGATCGATGATTTGCAGATACTCTCAAAAGATACATCAAATATGAATCAACGACAACTACAAGCGCATGGAATATTGTGCGAcatgatttcaaaaaaatatgaacttaaTTGA 813 0.3518 MSHEVQVTNNGVQSNDQEGETPQFCIQGGLKTINLREEVVSAPVAKTPKQRFQPKEDEIIIQSWLNVSKDPIVGVDQKGDSFWKRVGDAYNKHRDKNYKERKPMEIKDEHKKFTFEDPWRLLKDEPKWLAGISEPSAKRTKNSASGAYLSSSNQPTPTGNKYNPPSPISLRRPMGQKAAKRKEKEKLVKKSIPLGKIDDLQDDIKQKVHIMSEFSRNWTRIEEEKLEMEKERLKIDDLQILSKDTSNMNQRQLQAHGILCDMISKKYELN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01291 270 PANTHER - 107 255 - -
Tsu03g01291 270 MobiDBLite consensus disorder prediction 133 185 - -
Tsu03g01291 270 PANTHER - 32 108 - -
Tsu03g01291 270 MobiDBLite consensus disorder prediction 1 22 - -
Tsu03g01291 270 Coils Coil 221 241 - -
Tsu03g01291 270 MobiDBLite consensus disorder prediction 136 165 - -
Tsu03g01291 270 PANTHER OS07G0575233 PROTEIN 32 108 - -
Tsu03g01291 270 PANTHER OS07G0575233 PROTEIN 107 255 - -
Tsu03g01291 270 MobiDBLite consensus disorder prediction 1 23 - -
Tsu03g01291 270 Pfam No apical meristem-associated C-terminal domain 111 252 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01291 Tsu-Chr3 12344139 12345080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01291 46 189 Glutathione S-transferase Gene Family AT5G41240 26.961 1.78e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01291 - - mtr:MTR_4g083510 270.781