Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01261 ATGGCTTCTTCTGAACAACTCGTTCTCGAACTCAGCAACCCTGAACTCCGTGAAAACGCTCTTCTCGAACTCTCCAAGAAGAGAGAGCAATTCCAAGATCTTGCACCATTGCTATGGAATTCATTTGGCACTATTGCAGCACTTTTGCAGgAAATAGTGTCAATATACCCTGTATTGTCACCTCCTAATCTCTCTCCTGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCTTCTCATCCTGATACAAGGATGCTATTCCTGAATGcTCATATTCCGTTGTATCTGTATCCCTTCTTGAACACCACAAGTAAGTCAAGACCTTTTGAGTACTTGAGGCTTACTAGTCTCGGTGTCATCGGTGCATTGGTGAAGGTTGATGATACCGAGGTTATTAGTTTTCTGCTTTCAACTGAAATAATTCCCCTGTGCCTGCGTACCATGGAAATGGGGAGTGAGCTCTCAAAAACTGTTGCGACATTTATTGTTCAAAAGATTCTGTTGGACGATCTGGGCTTGGACTACATTTGTACCACAGCTGAGCGCTTTTTCGCTGTAGGTCGAGTTCTTGGAAACATGGTGGCAGCTCTTGCTGAGCAACCATCATCTCGTCTGTTGAAGCATATCATTCGATGCTATCTTCGTCTGTCAGATAACTTAAGGGCTTGTGATGCATTAAGAAGCTGTCTTCCAGACATGTTAAGGGATGCTACTTTTAGCAGCTGCCTTCGTGAGGATCCCACAACTAGGAAGTGGCTGCAACAATTGCTTCACAATGTTGGAGGGAATCGGGTTCCTGCATTACAAGGCGGAGGAGGCTTCGATCATCTAATGGTGAATTGA 858 0.4452 MASSEQLVLELSNPELRENALLELSKKREQFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLSPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDLGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNLRACDALRSCLPDMLRDATFSSCLREDPTTRKWLQQLLHNVGGNRVPALQGGGGFDHLMVN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01261 285 Pfam Cell differentiation family, Rcd1-like 7 265 - -
Tsu03g01261 285 Gene3D - 1 266 IPR011989 -
Tsu03g01261 285 PANTHER BNAA05G20110D PROTEIN 1 282 - -
Tsu03g01261 285 SUPERFAMILY ARM repeat 10 232 IPR016024 -
Tsu03g01261 285 PANTHER UNCHARACTERIZED 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01261 Tsu-Chr3 12019280 12025497 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Tsu03g01261 Rcd1 5.2e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01261 K12606 - gmx:100792784 545.428