Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01133 ATGATGCCAAGTGTTAAACCAAATCCATCGGACAAAGACTCAGAACCATTCGTTGAAACTGATCCAACAGGACGATACGGCCGATACAACGAACTACTAGGATCAGGTGCTTGTAAGAAAGTATACAGAGCATTTGATCAAGAAGAAGGAATAGAAGTAGCTTGGAATCAAGTTAAGCTCAGAAACTTCAGCAATGATCCTGCAATGATCGATAGACTTTACTCTGAAGTGAGGTTGCTTAGAAGCATGACTAACAAAAACATCATTGCTCTTTATAATTTTTGGAGAGATGAAGATCATAACACATTGAATTTCATTACTGAGGTTTGTACAAGTGGGAATTTAAGAGAGTATAGGAAGAAACATAAGCATGTTTCTGTCAAGGCTTTGAAGAAGTGGTCTAAGCAGATTTTAGAAGGGTTGAATTATTTGCATCTTCATGATCCTTGTATCATTCATAGAGATCTCAATTGCAGTAATGTTTTTGTCAATGGAAACACCGGCCagGTCAAGATTGGTGACTTAGGTTTGGCTGCAATTGTTGGAAAGAATCATTCAGCACATTCAGTTCTAGGGACACCAGAATTTATGGCACCAGAATTATATGAAGAAAATTACACTGAAATGGTTGACATATACTCATTTGGAATGTTAGTCTTAGAGATGGTGACACTAGAGATTCCTTATAGTGAATGTGACAATGTTgcaaaaatatacaaaaaggTATCTTCAGGTGTGAGACCTCAATCACTGAACAAAGTTAAAGATGCCGAAGTGAAGGCTTTCATTGAAAAATGTCTTGCTCAACCAAGGGCTAGACCTTCTGCTCAAGAATTGCTAAAGGATCCTTTCTTTGGCGTTTTAGACaatgatgaaaatgatgatgacGACAATAACTCAGTTAATTTGTAA 912 0.3575 MMPSVKPNPSDKDSEPFVETDPTGRYGRYNELLGSGACKKVYRAFDQEEGIEVAWNQVKLRNFSNDPAMIDRLYSEVRLLRSMTNKNIIALYNFWRDEDHNTLNFITEVCTSGNLREYRKKHKHVSVKALKKWSKQILEGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSVLGTPEFMAPELYEENYTEMVDIYSFGMLVLEMVTLEIPYSECDNVAKIYKKVSSGVRPQSLNKVKDAEVKAFIEKCLAQPRARPSAQELLKDPFFGVLDNDENDDDDNNSVNL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01133 303 Gene3D Transferase(Phosphotransferase) domain 1 110 288 - -
Tsu03g01133 303 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01133 303 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01133 303 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Tsu03g01133 303 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 299 - -
Tsu03g01133 303 CDD STKc_WNK 25 285 - -
Tsu03g01133 303 MobiDBLite consensus disorder prediction 1 23 - -
Tsu03g01133 303 SUPERFAMILY Protein kinase-like (PK-like) 22 285 IPR011009 -
Tsu03g01133 303 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01133 Tsu-Chr3 10658964 10660760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01133 11 288 MAP Kinase Kinase Kinase AT5G55560 82.796 4.05e-179 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tsu03g01133 Pkinase 1.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01133 K08867 - gmx:100818126 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01133 03 10658964 10660760 Tsu05g03969 05 50655033 50656993 PCT