Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01126 ATGATTGATCCGTGTGCAAGTGTTCTTTCTTGTGCTCGTGAAAACTTGCTTCCATTAGCCCGTAAACATTTGCTTCCACTAGCCCTTGATCATTTGCTTCCAATACTAAATGAAGCAGTGAACATGATTAGGGGTATCCCTAATGACAAAATTGCAGAAATGAAAAATGAACTTGAAACCATTGAAGAGTTCATCCATCAAGCAGATAAAATGGCTGATGATGTTGAGGGAGACGATCAAAGTCATGGAACCAGAGAAAAGATCAAGCAGCTTATAGAAGCATTTTTTCGCATACAAGATCTCATTGATGAATACATCATCCGTGAGGAGCAACAACTTCCAGATCCGGGATGTGTTGATGCTGCTTATGACTATGTCAAAACTAAGTTTCTCCGTCTCCAAATAGCACATGATATTCAGATCATCAAATCCCAtattaatgaaatgaaagaTACAAGTACTGAAAAAGATCATGGCTTCCAAATCAAATCTTCTTCGGAACAAGGATCAAGCAGTTCTGCTATAAACCCGAATGCCACGTTGTTGCAGAACCTGCGAAAAGCTCCTTTTTACATGAAGGAAGCAGATGTTGTCGGCTTTGAAAAGCCAAGAGATAAATTGGTTGATTGGCTGGTAAAGGGAAGAGATGAGTTCACAGTCGTCTCTGTGGTAGCAATGGGAGGGCAAGGAAAAACCACTCTTGCTAGAAAAGTTTTTGACAGCAAAGAGGTCATGGAACACTTCCGTGGTTATCGTGTATGGATCACAGTGTCACAACAATACAATATAGAAGAGTTGCTGAGAAAGCTGTTGAAGGAGCTTTGCGAACAACAAAAAGTCAATCCTCCTCAGAATATTCATGAAATGAATAAAGAGTCATTAGTTGATAAAGTGAGAAAGTACCTGCAGGAGAAAAGGTACGTTGTAGTTTTTGATGATGTATGGGAGAAACCTTTTTGGGCTGATATTAAATTTGCTATGAGTGATGATCAAAAAGGTTGTAGGATATTAATCACCACTAGATTCAAGGATGTTGCCACTTCTTGTAGAGAATCTTCTTTTGTTGAAATTCATGAATTGAAAGGTTTAGATGATGAACAATCTTTAAAATTGTTCAATAAGAAGGCATTTCATGACTTGAAGGAAGTTTGTCCGCCTAATCTTATTGATATATCTTCCAAAATTGTTAAAAAGTGTGGTGGATTACCACTAGCAATTGTAGTCATTGGTGGTCAATTATCATGCAAAAATAGAGATACAATTATTGAATGGTATAAGTTTAATGAAAATATCAAGCCAAAGTTAAAGAAAGATTTTGTGATAAACACATTTTTAGTTCCCAGTTACCATGATTTGTCTTACAATCTCAAGTCATgtcttttatattttggaatgTATCCTGAAGACTGTGAAATTAATTCCGAGAGACTAATTCGACAATGGATAGCTGAAGGGTTCGTAAAGGAGGAAGAGGGATTGACTTTGGAAGAGGTTGCAGAAGGATACTTAACAGAACTAATTCATAGAAGTTTGGTGCAAGTAGTTTCATTCAACATTGATGGAAGAGCAACAACTTGTCGTGTTCATGATCTAGTGCATGATATGATCCTTAAAAAATTTGAGGATTTAAGTTTTTGCAAGAATATAAGTGAGGATGGCCAATCAGCTTCAGATGGTATAGTTCGACGCCTATCAATAACAACCAATTCGAATAATTTCATGGAAAGTATTGTAAGCTCGCAGGTTCGATCACTGCTGGTTCCTAGACCTTACATATTACATGAATCCGTTGTAAGGCAAATTACTACAAAATACAGGTTGTTGAAGGTGTTTGATGCTAGACTTGCTGGAGAAATTAAAGTTCCAGAAGATTTGGGAAGTTTGAACCACTTGAAGTATTTTAGTATCGAAGCAGCTGCATTTGAAACTGCATTTACTGCACTTCCAAAATCCATTGGGATGCTTGAGAACCTAGAGACCTTGGATTTAGTAGAAACAGTCTTTGATGTTCCCAAAGAAATTTGCAAACTTAGAAAGTTACGACATTTTCTAGGCTTCAAATTGAATTTGGTTGAACTGAAGGATGGTATTGGAGGCATGACATCCCTACAAACTCTGCACACGGTATGTTTAAATAACAATGATGAAGACAGAGAGCTAATCGAAGAGCTAGGAAAGCTGAAGCAACTAAAGGAATTGGGCTTGAGAGGTGTCATGAGAAAACATAGGAGTGTTTTATCTTCGTCAATCAATAAGATGCAACAAATGGAAAATCTATCTATTGAATCAGACGAAGATATTATTGATTTAGATTTGAATTTAcctaagcttcaatatcttgTACTGAGAGGTCAGTTGGAGAAGTTGGCGGAGTGGATTCCAAAGCATCAAAATCTTGTTGAACTGAGGCTTTATGAATCCAAGCTAACAGAAGATCGAATGAAATTAGTCAAAAGTATGCCAAACTTGTTGTCCATTACTCTCTGGAATAATGCTTATGTAGGTGAAACCTTACATTTTCAAAATGAATGGTTTAAGAATTTGAAGGAACTATATCTTATTTGTATGGATAACTTGAAATCCATCCTTATTGACCAAGGTGCGTTACCTTCTCTGGAAAAGCTCTACATATACATAGCACCCCAACTCCAGAGGTTACCAACTGGCATTCAACGCTTAAAGAAGCTTGAAAGTCTCACTATTAGATATGCGAGTGAGGAATTAATAGAGAACATTTTACTGAATGGAGGAAAAGACCATTGGATCTTCAAGCAAGTGCCCTTTGTAGAAATTTATGATCAAAATCGCAAATCCATTTTCAATTGA 2826 0.3623 MIDPCASVLSCARENLLPLARKHLLPLALDHLLPILNEAVNMIRGIPNDKIAEMKNELETIEEFIHQADKMADDVEGDDQSHGTREKIKQLIEAFFRIQDLIDEYIIREEQQLPDPGCVDAAYDYVKTKFLRLQIAHDIQIIKSHINEMKDTSTEKDHGFQIKSSSEQGSSSSAINPNATLLQNLRKAPFYMKEADVVGFEKPRDKLVDWLVKGRDEFTVVSVVAMGGQGKTTLARKVFDSKEVMEHFRGYRVWITVSQQYNIEELLRKLLKELCEQQKVNPPQNIHEMNKESLVDKVRKYLQEKRYVVVFDDVWEKPFWADIKFAMSDDQKGCRILITTRFKDVATSCRESSFVEIHELKGLDDEQSLKLFNKKAFHDLKEVCPPNLIDISSKIVKKCGGLPLAIVVIGGQLSCKNRDTIIEWYKFNENIKPKLKKDFVINTFLVPSYHDLSYNLKSCLLYFGMYPEDCEINSERLIRQWIAEGFVKEEEGLTLEEVAEGYLTELIHRSLVQVVSFNIDGRATTCRVHDLVHDMILKKFEDLSFCKNISEDGQSASDGIVRRLSITTNSNNFMESIVSSQVRSLLVPRPYILHESVVRQITTKYRLLKVFDARLAGEIKVPEDLGSLNHLKYFSIEAAAFETAFTALPKSIGMLENLETLDLVETVFDVPKEICKLRKLRHFLGFKLNLVELKDGIGGMTSLQTLHTVCLNNNDEDRELIEELGKLKQLKELGLRGVMRKHRSVLSSSINKMQQMENLSIESDEDIIDLDLNLPKLQYLVLRGQLEKLAEWIPKHQNLVELRLYESKLTEDRMKLVKSMPNLLSITLWNNAYVGETLHFQNEWFKNLKELYLICMDNLKSILIDQGALPSLEKLYIYIAPQLQRLPTGIQRLKKLESLTIRYASEELIENILLNGGKDHWIFKQVPFVEIYDQNRKSIFN 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01126 941 PRINTS Disease resistance protein signature 220 235 - -
Tsu03g01126 941 PRINTS Disease resistance protein signature 301 315 - -
Tsu03g01126 941 PRINTS Disease resistance protein signature 399 413 - -
Tsu03g01126 941 PRINTS Disease resistance protein signature 653 669 - -
Tsu03g01126 941 Pfam NB-ARC domain 201 437 IPR002182 GO:0043531
Tsu03g01126 941 Gene3D - 450 540 IPR036388 -
Tsu03g01126 941 CDD RX-CC_like 40 151 IPR038005 -
Tsu03g01126 941 PANTHER DISEASE RESISTANCE PROTEIN RP 52 901 IPR044974 GO:0006952
Tsu03g01126 941 Coils Coil 51 71 - -
Tsu03g01126 941 Gene3D - 179 357 IPR027417 -
Tsu03g01126 941 Gene3D Ribonuclease Inhibitor 581 915 IPR032675 -
Tsu03g01126 941 Gene3D - 26 140 - -
Tsu03g01126 941 SUPERFAMILY L domain-like 527 903 - -
Tsu03g01126 941 Gene3D - 362 449 IPR042197 -
Tsu03g01126 941 Pfam Rx N-terminal domain 28 112 IPR041118 -
Tsu03g01126 941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 463 IPR027417 -
Tsu03g01126 941 PANTHER - 52 901 - -
Tsu03g01126 941 MobiDBLite consensus disorder prediction 152 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01126 Tsu-Chr3 10600711 10603536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01126 221 423 WRKY Transcription Factor Family AT5G45050 31.100 7.64e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01126 K13457 - gmx:100819372 724.546