Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01120 ATGGGAGGGCAGGGAAAAACCACTTTGGCAAAGAAAGTTTTTGACAACCCAAAGGTCGTTCAACATTTTGACTGTCATGTATGGATCACGGTTTCTCAACAATACAATGCAGAAGGACTGTTGAGGCACATGTTGTACAAGTTGGAAAAAGATCCTCCTGAGAGAATTAATCAAATGGATCAAGACTCGTTAGTAGATGAGGTGCGAAATTGCTTGCAACAAAAAAGGTACGTTGTCGTGTTTGATGATGTATGGGACATATGTTTTTGGGATGAAATTGACTTAGCTATGATTGATAACAAAAATGGTTCTAGGATAATAATCACAACAAGGAACGTGGATGTTGTGAATGCTTGTAAGAAATCTGCTTTTGTTGATCAGTATGAACTGAAAGGTTTAAATGATGAACAATCTTTGGAATTGTTCAATAAGAAAGCATttcatgatttgaatggatgtTGTCCAGAAAATCTTGTTGATATATCTtctaaaattgttaaaaaatgcCATGGATTACCACTAGCTATTGTAGTCACTGGTGGTCTTTTATCTGGCAAAAAAAGAAATGCAATTGAATGGGATAAGTTTAATGAAAATTTCAAGCCAAAGTTAAAGGAAGATTCCGtgataaacaaaattttagttCCTAGTTACCATGATTTGTCTTACAATCTCAAGTCATGTCTGTTATATTTTGGAATATATCCTGAAGACTATGAAGTTTATTCCAAGAGTCTAATTCGACAATGGATAGCTGAAGGGTTCGTAAAGGAGGAAGAGGGATTGACTTTGGAAGAGGTTGCAGAAGGATACTTAACAGAATTAATCCATAGAAGTTTGGTGCAAGTAGTTTCAATCAACTTTGATGGAAGAGCATGTTATTATCGTGTTCATGATCTAGTGCATGATATGATCCTTAAAAAATTTGAGGATTTAAGTTTTTGCAAGAATATAAGTGAGGATGGACAATCAGCTTTAAATGGAATAGTTCGACGCCTATCAATAACAACCAATTCGGATAATTTCATGGAAAGTATTGTAAGCTCGCAGGTTCGATCACTGCTCGTTCCTAGACCTTACATATTACATGAATCCGTTGTAAGGCAAATTACTACAAAATACAGGTTGTTGAAGGTGTTTGATGCTAGACTTGCTGGAGAAATTAAAGTTCCAGAAGATTTGGGAAGTTTGAACCACTTGAAGTATTTTAGGATCGAACCAGCTGAATATGAAACTGCATTTACTGCACTTCCAAAATCCATTGTGTTGCTTGAGAACCTAGAGACCTTGGATTTAGCAGATGATGCACGAGTCTATGATGTTCCGAAAGAAATTTGTAAACTTAGAAAGTTACGACATTTTCTAGGCTACGAATTGAATTTGGTTCAACTGAAGGATGGTATTGGAGGCATGACATCCCTACAAACTCTAAGTATGGTATGTTTAAATCCAAATGATGAAGACAAAGAGCTAATCGAAGAGCTAGGAAAGCTGAAGCAACTAAAGGAATTGGGCTTGAGAGGTGTGATGAGAAAACATATGAGTGTTTTATCTTCCTCAATCAATAAGATGCAACAAATGGAAAATCTATCTATTGCAGCAGATGGATATATTAttgatttggatttgaatttacctaagcttcaatatcttgAACTGAGAGGTTGGTTGGAGAAGTTGCCGGAGTGGATTCAAAAGCATCAAAATCTTGTTCAACTGGACCTTGATGACTCCAAGCTAACAGAGGATCCAATGGAATTATTCAAAAGTATGCCAAACTTGTTGTCCATTTCTTTCAATGATGCTTATGTAGGTGAAACCTTACATTTTCAAAATGGATGGTTTAAGAATTTGAAGGAACTACAACTTATTTTTATGGATAACTTGAAATCCATCCTTATTGACCAAGGTGCGTTGCCTTCTCTGGAAAGGATGCGCATATCCAATGCACCCCAACTCCAGAGGTTACCAACTGGCTTTCAACACTTAAAGAAGCTTGAACATCTCACTATTATTGATGTGAGTGAGGAATTAATAGAGAACATTTTACTGAATGGAGGAAAAGACCATTGGATCTTCAAGCAAGTGCCCTCTGTACAAATTCGTGATGGAAAGTTCAGATCCATTTTCAATTGA 2136 0.3507 MGGQGKTTLAKKVFDNPKVVQHFDCHVWITVSQQYNAEGLLRHMLYKLEKDPPERINQMDQDSLVDEVRNCLQQKRYVVVFDDVWDICFWDEIDLAMIDNKNGSRIIITTRNVDVVNACKKSAFVDQYELKGLNDEQSLELFNKKAFHDLNGCCPENLVDISSKIVKKCHGLPLAIVVTGGLLSGKKRNAIEWDKFNENFKPKLKEDSVINKILVPSYHDLSYNLKSCLLYFGIYPEDYEVYSKSLIRQWIAEGFVKEEEGLTLEEVAEGYLTELIHRSLVQVVSINFDGRACYYRVHDLVHDMILKKFEDLSFCKNISEDGQSALNGIVRRLSITTNSDNFMESIVSSQVRSLLVPRPYILHESVVRQITTKYRLLKVFDARLAGEIKVPEDLGSLNHLKYFRIEPAEYETAFTALPKSIVLLENLETLDLADDARVYDVPKEICKLRKLRHFLGYELNLVQLKDGIGGMTSLQTLSMVCLNPNDEDKELIEELGKLKQLKELGLRGVMRKHMSVLSSSINKMQQMENLSIAADGYIIDLDLNLPKLQYLELRGWLEKLPEWIQKHQNLVQLDLDDSKLTEDPMELFKSMPNLLSISFNDAYVGETLHFQNGWFKNLKELQLIFMDNLKSILIDQGALPSLERMRISNAPQLQRLPTGFQHLKKLEHLTIIDVSEELIENILLNGGKDHWIFKQVPSVQIRDGKFRSIFN 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01120 711 PANTHER - 1 676 - -
Tsu03g01120 711 Gene3D - 132 218 IPR042197 -
Tsu03g01120 711 Gene3D - 1 126 IPR027417 -
Tsu03g01120 711 Pfam NB-ARC domain 1 206 IPR002182 GO:0043531
Tsu03g01120 711 Gene3D - 219 309 IPR036388 -
Tsu03g01120 711 SUPERFAMILY L domain-like 296 674 - -
Tsu03g01120 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 232 IPR027417 -
Tsu03g01120 711 Gene3D Ribonuclease Inhibitor 350 688 IPR032675 -
Tsu03g01120 711 PRINTS Disease resistance protein signature 71 85 - -
Tsu03g01120 711 PRINTS Disease resistance protein signature 422 438 - -
Tsu03g01120 711 PRINTS Disease resistance protein signature 169 183 - -
Tsu03g01120 711 PANTHER DISEASE RESISTANCE PROTEIN RP 1 676 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01120 Tsu-Chr3 10541469 10543815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01120 1 188 WRKY Transcription Factor Family AT5G45050 32.124 5.39e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01120 K13457 - gmx:100819372 640.573