Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01115 ATGGCAGAAATGGCCGTGTCTTTAGTTCTTGACCAACTGATTCCACTGTTAAAGGAAGAAGCCAAGCTGTTGGGACGTATTCACAAAGAATTTAAAGACATTCAAAAGGAACTTCAAAGCATTCAAGCCTTTCTTAAGGATGCTGATAAAAAAGCTGAAGGAGACAACACTGACGAAGGAGTCAAAATATGGGTGAGGGAGGTTAGGGAAGCAGCTTTTCGTATTGAAGATGTCATTGATGATTATCTGATGCAAGTGAGACAGCAGCCTCGTGATCCTGGATGTGTAGCTTTACTCCGTAAGATTGTTCACTCACTCAAAGTTATTATCCCTCGTCATCAAATAGCGTCTGAGATTCAAGACATTAAGTCATCTGTTCGTGGGATCAAGGAAAGAAGCGAAAGATATGAGTTCCAAGCTTCTACTGAACAAGGATCGAGAAGCTTCAGCGGAAGCAAAAAGGCCACATGGCACGACCCTCGAAGGGATGCTGAGTACATTGATGAAGCTGAAATGGTAGGCTTTGAAGAACCCAAAAATGAATTGATTGGATGGTTGCTAGAGGGAAGATCTGAGCGCACTGTCATTGTTGTGGTAGGTATGGGAGGACAAGGAAAAACCACTCTTGCCAGAAAAGTTTTTGACAACAAAAAAGTAGTGGGAGACTTTGACTGTCGTGTATGGATCACAGTGTCAGAATCATACAATATAGAAGGGTTGTTGAGAGGCATGTTGAAGGAGCTTTACAAACAAAAAGGGGACTCTCCTCCTCAAGATATCAATCAAATGAATCGAGGGTCGTTGATTTCTGCGCTAAGAAACTACTTGCAACAAAAGAGGTATGTTTTCGTGTTTGATGATGTATGGGACAAACATTTTTGGAATGAGATTGGAAATGCATGTATTGATAATAAATTGGGGAGCAAGATATTTATTACAACAAGGAAAAAGGAAGTTGCCACAAATTATGTTGCAATCTCTTGTAAGAAATCATCATTTGTTGAAGTGCATGAGCTACAACCTTTAACTGAAGAACAATCTTTGGAGTTGTTCAATAAGAAGGTATTTCAATTTGACTTTGATGGATGTTGTCCAAAAGAACTCATTGatatatcttttgaaattgttaaaaaatgtaAGGGATTACCTCTAGCAATTGTTGCCATTGGCGGTCTTTTatcaacaaaagataaaaacacCTTTGAGTGGCAGAGGTTTAGTGAAAATCTAAGATTAGAGCTGAAGAAGGATTCTCATTTGTCTGGGATACAAGAAATTTTAAGTTTGAGTTATGATGATTTACCTTACTATCTTAGGTTATGCTTATTGTATTTTGGAATATATCCAGAAGATTATGAAATTGAATCGAATAGATTGTTTGGACAATGGATAGCTGAAGGGTTTGTGAAAAAGGAAAGGGGGAAAACTTTGGAAGATGTTGCAGAAGGATATTTAACAGAGTTGATCCGTAGAAGTTTGGTACAAGTATCTTCAATCAGCATTGACGGAAAAGTTGAATGTTGCCATGTTCATGATTTAATACGTGTGGTGATCCTTGACAAATttgatgattttaatttttgccACCATATTAGTGAATATGGTCAATCATTCTTGAGTGGAACAATTCGACGCCTATCAATAGCATCAGTTTCTGATAATCTAATGGAACATATTGAAAGCTTGCATGTTCGATCACTTCTTTGTTTCACTAATAAAGAATTACCTGAACACTTTGTGAGGAGAATTCCTACAAAATACAAGCAATTAAAAGTGATTGACTTTAAAGATGTAGAGCTTCCTGAAAATCTAGGGGGTTTAATCCACTTGAAGTTCTTAAGCTTGAGAAACAATAGACATATAAAAAACCTTCCTAAATCTATAAGCATGTTTCAAAACCTTGAGACCTTTGATCTACGGGAAACAGGTGTTCGTGAGATGCCAAAGGAGATTGGCAAGCTACGAAAGCTTCGACATCTTTTGGGAGACAGAATGTCTTtgattcaattaaaaaattgtatcgGATGCATTACATCATTGCAAACACTCCATAATGTTAGTTTAGATGGAGATGGAGTTGGAGTGGCAGAGCTAATTACAGAATTGGGAAAGTTGAAGGAGTTAAGGGAGCTAGGCTTGGTTGGTATTGTGAGAGAACATGGAAGCTATCTATCGTCCTCAATCAATGAAATGAAGTGCTTAGAGAAACTAGATATTGagtcaaaatcaaaagaaaaagtcaTTGATTTGCATTTGATTTCATCTCCACCACCTATGCTTCGAAATCTTACACTAAGTGGAAAGTTAGAGAAGTTTCCAGAATGGATTCCTGAACTTCAAAATCTTGTTGAGCTAAGGTTGGTACACTCTCAATTAACTGATGATCCAATGAAATCGCTAAAGAATATGAAAAACCTATTGTCCCTCTTTATCAGTGATTGTGCTTATGAAGGTGAAAGTTTACATTTTCAAGATGGTGAATTCCATAAACTTAAGGAACTATGCATTGCAAATTGGGATCACTTGAGTTCGATTGTTATCGAAAAAGGAGCACTGCGTTCTCTGAAAATGCTTACATTATACTATATCCCTCAGCTCAAAACAGCACCCATTGGCATCCAATATCTAGAGAAGCTTGAAGTTCTAAGAAATTGGTATATGCCAACTGAATTTGTGGAGAGTGTTTCTTCTGATGGAGGAAAAGAGCATTGGATCATAGAGCATGTGCCCCTT 2733 0.3641 MAEMAVSLVLDQLIPLLKEEAKLLGRIHKEFKDIQKELQSIQAFLKDADKKAEGDNTDEGVKIWVREVREAAFRIEDVIDDYLMQVRQQPRDPGCVALLRKIVHSLKVIIPRHQIASEIQDIKSSVRGIKERSERYEFQASTEQGSRSFSGSKKATWHDPRRDAEYIDEAEMVGFEEPKNELIGWLLEGRSERTVIVVVGMGGQGKTTLARKVFDNKKVVGDFDCRVWITVSESYNIEGLLRGMLKELYKQKGDSPPQDINQMNRGSLISALRNYLQQKRYVFVFDDVWDKHFWNEIGNACIDNKLGSKIFITTRKKEVATNYVAISCKKSSFVEVHELQPLTEEQSLELFNKKVFQFDFDGCCPKELIDISFEIVKKCKGLPLAIVAIGGLLSTKDKNTFEWQRFSENLRLELKKDSHLSGIQEILSLSYDDLPYYLRLCLLYFGIYPEDYEIESNRLFGQWIAEGFVKKERGKTLEDVAEGYLTELIRRSLVQVSSISIDGKVECCHVHDLIRVVILDKFDDFNFCHHISEYGQSFLSGTIRRLSIASVSDNLMEHIESLHVRSLLCFTNKELPEHFVRRIPTKYKQLKVIDFKDVELPENLGGLIHLKFLSLRNNRHIKNLPKSISMFQNLETFDLRETGVREMPKEIGKLRKLRHLLGDRMSLIQLKNCIGCITSLQTLHNVSLDGDGVGVAELITELGKLKELRELGLVGIVREHGSYLSSSINEMKCLEKLDIESKSKEKVIDLHLISSPPPMLRNLTLSGKLEKFPEWIPELQNLVELRLVHSQLTDDPMKSLKNMKNLLSLFISDCAYEGESLHFQDGEFHKLKELCIANWDHLSSIVIEKGALRSLKMLTLYYIPQLKTAPIGIQYLEKLEVLRNWYMPTEFVESVSSDGGKEHWIIEHVPL 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01115 911 Gene3D Ribonuclease Inhibitor 547 894 IPR032675 -
Tsu03g01115 911 Gene3D - 164 327 IPR027417 -
Tsu03g01115 911 PANTHER - 23 864 - -
Tsu03g01115 911 SUPERFAMILY L domain-like 751 751 - -
Tsu03g01115 911 Gene3D - 437 521 IPR036388 -
Tsu03g01115 911 Pfam Rx N-terminal domain 5 92 IPR041118 -
Tsu03g01115 911 CDD RX-CC_like 2 131 IPR038005 -
Tsu03g01115 911 Gene3D - 4 116 - -
Tsu03g01115 911 SUPERFAMILY L domain-like 553 889 - -
Tsu03g01115 911 PRINTS Disease resistance protein signature 379 393 - -
Tsu03g01115 911 PRINTS Disease resistance protein signature 195 210 - -
Tsu03g01115 911 PRINTS Disease resistance protein signature 275 289 - -
Tsu03g01115 911 PRINTS Disease resistance protein signature 801 817 - -
Tsu03g01115 911 Gene3D - 341 435 IPR042197 -
Tsu03g01115 911 PANTHER DISEASE RESISTANCE PROTEIN RP 23 864 IPR044974 GO:0006952
Tsu03g01115 911 Pfam NB-ARC domain 176 433 IPR002182 GO:0043531
Tsu03g01115 911 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01115 Tsu-Chr3 10429627 10438155 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01115 200 398 WRKY Transcription Factor Family AT5G45050 27.053 1.13e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01115 K13457 - gmx:100819372 973