Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01111 ATGGCAGAAATGGCCGTGTCTTTAGTTCTTGACCAACTGATTCCACTGTTAAGGGAAGAATCCAAGCTGTTGGGAGGTATTCacaaagaaattaaagacaTTCAAAATGAACTACTATACATTCAAGCTTTTCTTAAGGATGCTGATAAAAAAGCTGAAGGAGACAACACTGACGAAGGAGTCAAAACATGGGTGAAGCAGGTTAGGGAAGCAGCTTTTCGTATTGAAGATGTCATTGATGATTATCTGATGCAAGTGAGACAGCAGCCTCGTGATCCTGGATGTGTAGCTTTACTCCGTAAGATTGTTCACTCACTCAAAGTTATTATCCCTCGTCATCAAATAGCGTCTGAGATTCAAGACATTAAGTCATCTGTTCGTGGGATCAAGGAAAGAAGCGAAAGATATGGGTTCCAAGCTTCTACTGAACAAGGATCGAGAAGCTTCAGCGGAAGCAAAAAGGCCACATGGCACGACCCTCGAAGGGATGCTGAGTACATTGATGAAGCTGAAATGGTAGGCTTTGAAGAACCCAAAAATGAATTGATTGGATGGTTGCTAGAGGGAAGATCTGAGCGCACTGTCATTGTTGTGGTAGGTATGGGAGGACAAGGAAAAACCACTCTTGCCAGAAAAGTTTTTGACAACAAAAAAGTAGTGGGAGACTTTGACTGTCGTGTATGGATCACAGTGTCAGAATCATACAATATAGAAGGGTTGTTGAGAGGCATGTTGAAGGAGCTTTACAAACAAAAAGGGGACTCTCCTCAAGATATCGATCAAATGGTTCGAGGGTCGTTGATTTCTGCGCTAAGAAACTACTTGCAACAAAAGAGGTATATTTTCGTGTTTGATGATGTATGGGACAAACATTTTTGGAATGAGATTGGAAATGCATGTATTGATAATAAATTGGGGagcaaaatatttattacaaCAAGGAAAAAGGAAGTTGCCACAAATTGTCATAAATCATCTCTTGTTAAAGTGCATGATCTGCAGCCTCTATCGGAAGATCAATCATTTGAGTTGTTCAAAAAGAAGACATTCCGATCTGAGTCTGATGGATGTTGTACGAATGCGCTCAAAGAGATATCTTTGGAAATTGCTAAGAAATGCCAAGGTTTACCCCTAGCAATTGTTTCCATTGGCGGTCTATTGTctacaaaagagaaaaatgtaaTTGAGTGGCGaagattttgtaaaaatatgaCTTTAGAACTAAACAAGGATTCTAATTTGACCGGGATAAAGAAAATTTTAGCTTTCAGCTATGATGATTTGCCATTTCATCTTAAGTCATGTTTGTTGTATTTTGGAATGTATCCAGAAGATTACCTAGTTAAATCAAAGAGACTGATTCGACAATGGATAGCTGAAGGATTTGTGAAAGAAGAAAGCGGGAATACTTTGGAAGAAGTGGCAGAAGGATATTTAACAGAGTTGATCCATAGAAGTTTGGTGCAAGCATTTTCTGTTAGAGTTGATGGAAAAACTCAAAGTTGTTGTGTTCATGATCTAACACGTGTGATGATTCTTGAAAAGTGTGAAGCTTTAAGTTTCTGCAAGCAAATCAGTGAATATGGTCATTCATCTTCATGTGGAATTATTCGACGCCTATCAATAACAACCCCTTCCAATGGTTTTACGACAGGTATTGAAAACTCGCATGTGCATTCATTATTTCTTTTCGCATATAACTCacaatttttgaacaaatactTTGTGAAGAGAATCTTTACAAAATATAGACGCTTGAAGGTGCTTGAGTATGCGGTTTATTCTGAACTTAAATTGAGTAATATCCTTCATGAAAATTTGGGAAGCTTGATTCACTTAAAGTATTTAAGCTTCGTGAATTATTATTGTGGGAAAACTGAATTTGAACTTCCCAAATCAATTGGCATGCTCCAAAACCTGGAGACTTTGGATCTGGGAAGATATTGCGATAAAATACCAAAGGAGGTTAGCAATCTTAGAAAGTTACAACATCTTTTGGGCATCGGAATGTCTTTGTTTCCATTGAAGGGTGGTATAGGAAGCATGGAATCTCTACAAACTCTGAGTAGTGTGagaattgatgatgatgatggaataGAGCTAATTAAAGAGCTAGGAAAGCTAAGGCAATTAAGGAAATTGAGCTTGTTTAATGTGAAGCAAGTTCATATAAGCATTTTATCTTCTTCATTGAATGAGATGCAACATTTGGAGAATCTAAGCATTCTTTGTTATCATTTCACTGGTTTTCATTTGAATTCACCTCCATCTATGCTTCAACGTCTTGACCTAAGTGGACAATTGGAGAAGTTTCCGGAATGGATTCTTCAACTTCAAAATCTTGTTAAGTTGAAATTAGATTCTTCTTCCTTAAATGATGATCCAATGAAGTTTttagaaaaaatgcaaaatttgtTGTACCTATCAATCGACAATGCTTATGACGGTGAAAGTTTACATTTTCATGATGGAGGGTTTCGAAATCTAAAGGAACTATACATCAGTCAATTGTATCACTTGAATTCAATTGTTATCGACAAAGGAGCATTGCAATCTCTAAAAAAGTTCAAGTTATCTGATATCCCCAACCTCAAGACTGTTCCCGTTGGCATCCAACACTTAGAAAAACTTGAAGTTCTCGATGTTTAA 2649 0.359 MAEMAVSLVLDQLIPLLREESKLLGGIHKEIKDIQNELLYIQAFLKDADKKAEGDNTDEGVKTWVKQVREAAFRIEDVIDDYLMQVRQQPRDPGCVALLRKIVHSLKVIIPRHQIASEIQDIKSSVRGIKERSERYGFQASTEQGSRSFSGSKKATWHDPRRDAEYIDEAEMVGFEEPKNELIGWLLEGRSERTVIVVVGMGGQGKTTLARKVFDNKKVVGDFDCRVWITVSESYNIEGLLRGMLKELYKQKGDSPQDIDQMVRGSLISALRNYLQQKRYIFVFDDVWDKHFWNEIGNACIDNKLGSKIFITTRKKEVATNCHKSSLVKVHDLQPLSEDQSFELFKKKTFRSESDGCCTNALKEISLEIAKKCQGLPLAIVSIGGLLSTKEKNVIEWRRFCKNMTLELNKDSNLTGIKKILAFSYDDLPFHLKSCLLYFGMYPEDYLVKSKRLIRQWIAEGFVKEESGNTLEEVAEGYLTELIHRSLVQAFSVRVDGKTQSCCVHDLTRVMILEKCEALSFCKQISEYGHSSSCGIIRRLSITTPSNGFTTGIENSHVHSLFLFAYNSQFLNKYFVKRIFTKYRRLKVLEYAVYSELKLSNILHENLGSLIHLKYLSFVNYYCGKTEFELPKSIGMLQNLETLDLGRYCDKIPKEVSNLRKLQHLLGIGMSLFPLKGGIGSMESLQTLSSVRIDDDDGIELIKELGKLRQLRKLSLFNVKQVHISILSSSLNEMQHLENLSILCYHFTGFHLNSPPSMLQRLDLSGQLEKFPEWILQLQNLVKLKLDSSSLNDDPMKFLEKMQNLLYLSIDNAYDGESLHFHDGGFRNLKELYISQLYHLNSIVIDKGALQSLKKFKLSDIPNLKTVPVGIQHLEKLEVLDV 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01111 882 Gene3D - 425 516 IPR036388 -
Tsu03g01111 882 Gene3D - 164 331 IPR027417 -
Tsu03g01111 882 Pfam Rx N-terminal domain 5 92 IPR041118 -
Tsu03g01111 882 PRINTS Disease resistance protein signature 195 210 - -
Tsu03g01111 882 PRINTS Disease resistance protein signature 274 288 - -
Tsu03g01111 882 PRINTS Disease resistance protein signature 373 387 - -
Tsu03g01111 882 PRINTS Disease resistance protein signature 872 882 - -
Tsu03g01111 882 SUPERFAMILY L domain-like 547 881 - -
Tsu03g01111 882 Gene3D - 335 424 IPR042197 -
Tsu03g01111 882 PANTHER - 30 881 - -
Tsu03g01111 882 CDD RX-CC_like 2 131 IPR038005 -
Tsu03g01111 882 Gene3D Ribonuclease Inhibitor 558 882 IPR032675 -
Tsu03g01111 882 Pfam NB-ARC domain 176 427 IPR002182 GO:0043531
Tsu03g01111 882 Gene3D - 4 116 - -
Tsu03g01111 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 439 IPR027417 -
Tsu03g01111 882 PANTHER DISEASE RESISTANCE PROTEIN RP 30 881 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01111 Tsu-Chr3 10413336 10415984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01111 198 392 WRKY Transcription Factor Family AT5G45050 26.471 1.28e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01111 K13457 - gmx:100789363 890.567