Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01107 ATGGGGTTGGAGCTTCATATTCTCATATCAACTATCCTTGGTTTACTCTTGTTCATAGTAATCAAAATTACTTGTAAATCATCAAAAGCTCAGAAAACAAACTCCAAATTGCCGCCAGGGCCAAGAAAACTTCCACTCATAGGGAACATCCACCAACTTGGAGCCTTACCTCATCAATCCCTAGCAAAATTAGCACAACAATATGGACCTCTCATGCACATGAAACTTGGTGAACTTTCTTGCATAGTTGTTTCATCTCAAGAAATGGCTAAAGAGGTGATGAAAACACATGATCTCAACTTTGCAAATAGGCCTCCACTTCTTGCAGCTGAAATAATCACTTATGGATATAAAGGAATGACTTTTTCACCACATGGATCCTATTGGAGACAAATGAGGAAGATTTGTACTATGGAGCTTTTATCACAAAAGCGCGTCGAATCTTTTCGATTACAAAGGGAAGAAGAAATAGCAAACCTTGTCAAAGAAATAACTTTGAGTGAAGGGTCACCTATAAATATTAGTGAGAAGCTTGATTCATTTGCTTATGGATTAACTTCAAGAACAGCTTTTGGTGCACAAATTGAAGGTAAAGAAAAGTATAGGAAACTTATGAAGGATGTATCAAAGATGGCTGGAGGGTTTTCTCTTGCAGATTTGTTTCCTTCAATTGGAATTCTTCAAGTTCTTACTGGATTAAGGCAAGGAATTGAGAAGCTTCATAGAGAAATGGATGAGATACTAGAGAATGTCGTAAGAAATCATAAACAAAAGAATTTGGAAACTAGGGACAAGGAAGAAACAGGGGAGGATCTTGTTGATGTTCTTTTGAAGCTGCAAAAGGACAGTGATTTGGAACATCCCTTGTCAGACAACGTTGTCAAAGCAACAATTTTGGATATCTTCAGTGCCGGCAGTGACACCACATTTACAATTTTAGAATGGACAATGTCAGAATTGATTAAGAATCCACAAGTAATGCAGAAAGCACAAGCTGAAGTAAGAGGTGTCTATAATGAAAAAGGGTATGTTGATGAACTAAATCTTCACAAACTCACATACATGAAATCGGTTATAAAAGAAACAATGCGTTTACATACACCTGCTCCATTGTTACTTCCAAGGCAATGCAGTGAAAAatgtaagataaatggatatgaAATACCAGCCAAATGCAAAGTCATTGTTAATGCATGGTCGATAGGTAGAGATTCGAGATTTTGGATCGAAGGTGAGAAATTTGTTCCAGAAAGATTTATTGATAGTTCAGTTGATTACAAAGGTTTGAATTTCGAGTTTATTCCATTTGGTGCTGGAAGAAGGATTTGTCCTGGTATGACATTTGGTATTGCTAACTTGGAAATCTCACTTGCAAATATGCTTTACCATTTTGATTGGAAGACGCTTGATCAGGCTGAGCAACTCGACATGACTGAATCTTTTGCGTTGGTGGTTAGGAGAAAACATGATTTGTGGTTGGTTCCCACTACTTATTATAGTTCATGTTAA 1509 0.3665 MGLELHILISTILGLLLFIVIKITCKSSKAQKTNSKLPPGPRKLPLIGNIHQLGALPHQSLAKLAQQYGPLMHMKLGELSCIVVSSQEMAKEVMKTHDLNFANRPPLLAAEIITYGYKGMTFSPHGSYWRQMRKICTMELLSQKRVESFRLQREEEIANLVKEITLSEGSPINISEKLDSFAYGLTSRTAFGAQIEGKEKYRKLMKDVSKMAGGFSLADLFPSIGILQVLTGLRQGIEKLHREMDEILENVVRNHKQKNLETRDKEETGEDLVDVLLKLQKDSDLEHPLSDNVVKATILDIFSAGSDTTFTILEWTMSELIKNPQVMQKAQAEVRGVYNEKGYVDELNLHKLTYMKSVIKETMRLHTPAPLLLPRQCSEKCKINGYEIPAKCKVIVNAWSIGRDSRFWIEGEKFVPERFIDSSVDYKGLNFEFIPFGAGRRICPGMTFGIANLEISLANMLYHFDWKTLDQAEQLDMTESFALVVRRKHDLWLVPTTYYSSC 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01107 502 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 Coils Coil 230 250 - -
Tsu03g01107 502 Pfam Cytochrome P450 38 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 SUPERFAMILY Cytochrome P450 38 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Tsu03g01107 502 Gene3D Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01107 502 PANTHER CYTOCHROME P450 71B11-RELATED 8 499 - -
Tsu03g01107 502 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01107 Tsu-Chr3 10352289 10354592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01107 12 498 Cytochrome P450 AT3G26300 40.964 9.10e-139 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01107 - - gmx:100819247 683.33