Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01106 ATGGAGATTGagcccaaaaatatttcatCACCTATGTTCATCATACCCTTCTTTGTATTCATAGTCTTTATCCTAATTTTGAGATCAAAAAAACCAAAGCCTTCAAAATCCAAGTTACCACCAGGTCCACCAAAACTACCTCTTATAGGAAACTTACACCAACTTGGTTCATTACTTCATCATAGTCTAacaaaattatcacaaaaatatGGTCCACTAATGCATATAAAACTAGGTGAAATTTCAATCATAGTTGTGTCTTCTCCTGAAATTGCCaaacaaataatgaaaacacatgacacaaaattttcaaataggCCACATATTTTAGCTTCTGATATTATAACCTATGGTTCAAAAGGCATGACATTTTCACCTTATGGTAGTTATTGGAGACAAATGAGAAAAATTTGCACCTTTGAACTATTAACACCAAAACGTGTTGAATCATTTCAATCAATTAGGGAACAAGAGGTGTCAAATATTGTTAAGGAGATAAGTTTGAGTGAAGGGTTATCTATTAATCTTAGTAagatgattaatttattttcctaTGGTTTAACATTAAGAATTGCCTTAGGTGGAAAATCAGAAGATCAAGAAGAATTTATGGTTGCTACGAAGGACGTAGCGAAACTAGCTGGTGGTTTTTCTGTAGCTGATTTGTTTCCTTCCTTTAAAGTTCTTCATGTTTTGACAAGAATAAGGTCTAAAGCTGAGAAGGTTCATAAAGAAATTGATAGGATTCTTGATAGAATTCTAAGATATCATCAATTGGATACAAGTTTAGAAACAAAGGTAATCAATGAAAAAGAAGGTGAAGATTTTGTTGATGTATTGCTAAGGCTTCAGAAGCAGAACAACCTTGAGCATCCTCTATCTGATAGCATTATCAAAGCAACTATGATGGATATCTTTACTGCTGGAAGTGGAACGGTATCCAAAACCATAGAGTGGGCAATGTCAGAACTTATGAGAAACCCAAGAGTGATGGAAAAAGCACAAATTGAGGTAAGAAGGGTGTTTGATTCAATTGGGCGTGTAGATGAAACAAACCTTCACGAactaaaatacctaaaatcagTGATAAAAGAAACCTTGCGTCTACATGGTCCGGTTACATTGTTACTACCACGGGAATGTAGTGAAAATTGTGAAATTAATGGATATGAGATACCGGCCAAGACTAAGGTGATAGTAAATGCTTATGCAATTGGAATGGATCCAAACTTCTGGGATGAACCTAAGAAGTTTTATCCAGAAAGATTCATTGATAGCTCAATTGATTACAAAGGTTTGGATTTTCAATTTATTCCATTTGGTGCTGGAAGAAGAATGTGTCCTGGCATTACATTTGGTATTGTTAATGTTGAAATCTTATTAGCAAATTtgctttttcattttgattggaAAATGGTTGATGGATTGAAGGCCGAAGAACTTGACATGAGTGAGTCATTTGGTTTGGCTGTTAGGAGAAAATATGATTTGTATATGATTCCTATTATGTATCATTCAACTGTTGAGTGCTAA 1533 0.319 MEIEPKNISSPMFIIPFFVFIVFILILRSKKPKPSKSKLPPGPPKLPLIGNLHQLGSLLHHSLTKLSQKYGPLMHIKLGEISIIVVSSPEIAKQIMKTHDTKFSNRPHILASDIITYGSKGMTFSPYGSYWRQMRKICTFELLTPKRVESFQSIREQEVSNIVKEISLSEGLSINLSKMINLFSYGLTLRIALGGKSEDQEEFMVATKDVAKLAGGFSVADLFPSFKVLHVLTRIRSKAEKVHKEIDRILDRILRYHQLDTSLETKVINEKEGEDFVDVLLRLQKQNNLEHPLSDSIIKATMMDIFTAGSGTVSKTIEWAMSELMRNPRVMEKAQIEVRRVFDSIGRVDETNLHELKYLKSVIKETLRLHGPVTLLLPRECSENCEINGYEIPAKTKVIVNAYAIGMDPNFWDEPKKFYPERFIDSSIDYKGLDFQFIPFGAGRRMCPGITFGIVNVEILLANLLFHFDWKMVDGLKAEELDMSESFGLAVRRKYDLYMIPIMYHSTVEC 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01106 510 Pfam Cytochrome P450 40 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Tsu03g01106 510 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 505 - -
Tsu03g01106 510 PANTHER CYTOCHROME P450 71B11-RELATED 10 505 - -
Tsu03g01106 510 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01106 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01106 Tsu-Chr3 10342424 10344237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01106 10 503 Cytochrome P450 AT5G25120 41.188 2.63e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01106 - - gmx:100818000 686.797