Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01101 ATGAATACTCATGATCTTGTCTTTTCTTCAAGGCCTTCTATTCAAGCTTCAGAGATAATGAATAACTCTCTTGGTATTGCTTTTGCACCTTATGGTGATTATTGGAGGCAACTTAGAAAAATTTGTACTTTGGAACTATTAAGTACAAAACGTGTCCAATCTTTTCAACCAATTAGAAGTGAAGAGATAAGTAATCTAATAAAATGGATTGCTTCAAAAGAAGGATCACAAATTAATCTCACCAAAGAAGTGttttcaacaatatttataATCACTTCTAGGGTGGCTTTTGGAAAAAAGTGCACGGAAAATCAGAAATTCATATCATTGGTAAATGAAGCCAGCAAGGTTGCTGGAGGTTTTAATTTGGGAGATTTGTACCCTTCTTATAAATGGCTTCAAAACATATCTGGATTGAAGCCTAAGCTTGAAAAGTTACAGAAACAAACTGATAAGATTTTGCAAAACATTGTTGATGAGCATAGGGAGGTTAATAAATCAAGGCCCAATGAAGATCATGGAGAGGAAGATCTTGTAGATGTGCTATTGAAACAGGAATATTCTTTAAGTGATAATACTGTCAAGGCTGTGATCTTGGATATGTATGGAGGTGGAAGTGAGACTTCAGCAGCTACCATAATATGGGCAGTGGCAGAGATGATTAAAAATCCAAGAATCATGGAGAAGGTACAAGCTGAGGTAAGAGAGGtatttgataaagaaaaaatacCCGATGAACATGACATAGAgaagttaaaatatttaaaatatgtcGTGAAAGAGACATTGAGATTACACCCTCCCGATACACTTTTGCTTCCAAGAGAATGCGGACAAGCATGTGAGATAAAGGGGTATGATATACCTTTTAAAAGCAAAATTATAGTGAATGCTTGGGCTATTGGAAGAGAACCAAATTATTGGAATGACCCGGACAAATTTTATCCTGAAAGGTTCATTGAAAGTtgtgtagattataaaggtaaTAATTTTGAGTTCATTCCATTTGGTGCTGGAAGAAGAATGTGCCCTGGGGTCACCTTTGCTTTGGTCAACATTGAATATCCACTTGCATTGTTGATGTATCACTTTGATTGGAAACTTCCAAGtgcaaagaaaaatgaagatttaGACATGAGTGAGACATTTGGGGTAGCAGTTACTCGAAAAGAAGATTTATTCCTTATTCCTACAATTTATCGTCCTTAG 1209 0.3383 MNTHDLVFSSRPSIQASEIMNNSLGIAFAPYGDYWRQLRKICTLELLSTKRVQSFQPIRSEEISNLIKWIASKEGSQINLTKEVFSTIFIITSRVAFGKKCTENQKFISLVNEASKVAGGFNLGDLYPSYKWLQNISGLKPKLEKLQKQTDKILQNIVDEHREVNKSRPNEDHGEEDLVDVLLKQEYSLSDNTVKAVILDMYGGGSETSAATIIWAVAEMIKNPRIMEKVQAEVREVFDKEKIPDEHDIEKLKYLKYVVKETLRLHPPDTLLLPRECGQACEIKGYDIPFKSKIIVNAWAIGREPNYWNDPDKFYPERFIESCVDYKGNNFEFIPFGAGRRMCPGVTFALVNIEYPLALLMYHFDWKLPSAKKNEDLDMSETFGVAVTRKEDLFLIPTIYRP 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01101 402 SUPERFAMILY Cytochrome P450 2 397 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PRINTS P450 superfamily signature 257 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PRINTS P450 superfamily signature 204 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PRINTS P450 superfamily signature 334 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PANTHER CYTOCHROME P450 71D9 1 400 - -
Tsu03g01101 402 Gene3D Cytochrome P450 1 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PRINTS E-class P450 group I signature 213 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PRINTS E-class P450 group I signature 256 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PRINTS E-class P450 group I signature 297 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PRINTS E-class P450 group I signature 333 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PRINTS E-class P450 group I signature 343 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PRINTS E-class P450 group I signature 193 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01101 402 PANTHER CYTOCHROME P450 71B11-RELATED 1 400 - -
Tsu03g01101 402 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 336 345 IPR017972 GO:0005506|GO:0016705
Tsu03g01101 402 Coils Coil 143 163 - -
Tsu03g01101 402 Pfam Cytochrome P450 8 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01101 Tsu-Chr3 10306397 10309163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01101 1 400 Cytochrome P450 AT3G26320 38.702 6.03e-110 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01101 - K13267 gmx:100813216 570.852