Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01095 ATGCTGAagaaaattaacaacaaaagtcatgGAACCAGAGAAATTATTAAGGAGCTAATAGAAGCATCTTTTCACATAGAAGATGTCATTGATGAATATACGATCCGTGAGGAACAACAACTTCCTGATCCTGGATGTGCTGCTTTTGCTGCTAACTATGTCAAAACTATGTCTCTTCGTCTCCAAATTGCCTACAAGATTCAGAACATCAAATCTCGAATTGATGAAATAAAAGATATAAGTTGTGAAAAAGATGATGGATTCCCACAAATCCAATCTTCTTGGAAACAAGGACCAAGTAGTTGTGAAGTTCTGTACAACATTCGTTCGTCTCCATTGCACATTGATGAAGCCGATGTTGTGGGCTTTGAAgagccaaaaaaaatattgattgattGGTTAGTAGAGGGAAGAGCAGAGCGGACAGTACTCTCCGTGGTTGCAATGGGAGGGCAGGGAAAAACCACTTTGGCAAAGAATGTTTTTGACCGCAACATGGTCATTAAACATTTTGACTGTCGTGTATGGATCACAGTTTCTCAATCATACAATGCAGAAGAATTGTTGAAGGACATGTTGCAAAAGTTATACAAGCAAAACGGACAAGATCCTCCTCAAAGTATTAATCAAATGGATCGAGACTCGTTAGTTGATGAAGTGAAAAACTGCTTGCAACAAAAAAGGTATGTTATCGTGTTTGATGATGTATGGAACATACGTTTTTGGGATGAAATTGAATTTGCTATGATTGATAACAAAAATGGTTCTAAGATATTAATAACAACAAGAAATATGGAAGTTGCGAATGCTTGTAAGAAATCTTCTTTTGTCGAAGTGCATAAACTGAAACCTTTAActaaagaaaaatctttggaatTGTTCAATAAGAAGGCATTTCATAACTTGAAAGGTTGTTGCCCAGAAAATCTTATTGATATATCTtccaaaataattgaaaaatgcAATGGATTACCACTAGCAATTGTAGTCATCGGTGGTCTTTTATCTTGCAAAGATAGAAAACCAATCGAATGGTATAAGTTTAGTGAAAATATAAATCCAAAGTTAAAGGAAGATTCcaaggtaaaaaaaattctagctCTTAGTTACCATGATTTGTCTTACAACCTCAAGTCATGTTTGTTATATTTTGGATTATATCCTGAGGACTTTATAGTTCCTTCGAATTTATTAACTCGACAATGGATGGCTGAAGGGTTCATAAAAGAAGATATAGGAAGCACATTGGAAGAGGTTGCAGAAGAATATTTAACAGAGTTGATTCGTAGAAATTTGGTGCAAGTACTTTCCATCAGTATTGACGGAAGAGCAAAGAGTTGTCGTGTTCATGATCTAGTGCATGCTATGATTGTTGAAAAATGTGAGGATTTAAATTTTTGCAAGAACATTTTTGGGGACAAACAATCATCTTTAACTGGAATGATTCGACGTCTATCCATAAGAACTACCAATTCTGATAATTTATTGAACAATACTGAAAACTCACATGTTCGATCACTGTTAGTTCACACTTCTAAAACATTACCCGAATCCTTTGGAAAGAGAAtcccaacaaaatacaagtgctTGAAGGTTCTTGATTTTGAGCATGATGATCAATTTCTTGAAGTTCCTAATGATTTGGGAAGTTTGAGCCAGTTGAAGTATTTTGGGTTCCGAGTGATGGGAGTTCAAAGATTTCAACTTCCCAAATCTATTGGCAAGCTCGAGAACCTAGAGACATTGGACTTAAGATTTTCAAATAAGATGGAAATCAAAATGCCAAAGGAGATTTGCATGCTTAGAAAGCTACGCCATTTATTAGGCAACAAAATgtctttaattttgttgaagGAAGGTATTGGAGGCATGGAATCCCTTCAAACTCTAAGTGATGTTTATTCAAATGAAGATGAAAAGGATAATAATCCAAGAGTTAGGAAAGCTGAAACAGTTAAGGAAATTGGTCTTGAGAGGTCTTAA 1983 0.3308 MLKKINNKSHGTREIIKELIEASFHIEDVIDEYTIREEQQLPDPGCAAFAANYVKTMSLRLQIAYKIQNIKSRIDEIKDISCEKDDGFPQIQSSWKQGPSSCEVLYNIRSSPLHIDEADVVGFEEPKKILIDWLVEGRAERTVLSVVAMGGQGKTTLAKNVFDRNMVIKHFDCRVWITVSQSYNAEELLKDMLQKLYKQNGQDPPQSINQMDRDSLVDEVKNCLQQKRYVIVFDDVWNIRFWDEIEFAMIDNKNGSKILITTRNMEVANACKKSSFVEVHKLKPLTKEKSLELFNKKAFHNLKGCCPENLIDISSKIIEKCNGLPLAIVVIGGLLSCKDRKPIEWYKFSENINPKLKEDSKVKKILALSYHDLSYNLKSCLLYFGLYPEDFIVPSNLLTRQWMAEGFIKEDIGSTLEEVAEEYLTELIRRNLVQVLSISIDGRAKSCRVHDLVHAMIVEKCEDLNFCKNIFGDKQSSLTGMIRRLSIRTTNSDNLLNNTENSHVRSLLVHTSKTLPESFGKRIPTKYKCLKVLDFEHDDQFLEVPNDLGSLSQLKYFGFRVMGVQRFQLPKSIGKLENLETLDLRFSNKMEIKMPKEICMLRKLRHLLGNKMSLILLKEGIGGMESLQTLSDVYSNEDEKDNNPRVRKAETVKEIGLERS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01095 660 Gene3D - 284 369 IPR042197 -
Tsu03g01095 660 CDD RX-CC_like 4 79 IPR038005 -
Tsu03g01095 660 Gene3D Ribonuclease Inhibitor 485 660 IPR032675 -
Tsu03g01095 660 Gene3D - 370 461 IPR036388 -
Tsu03g01095 660 PANTHER DISEASE RESISTANCE PROTEIN RP 8 642 IPR044974 GO:0006952
Tsu03g01095 660 Pfam NB-ARC domain 126 366 IPR002182 GO:0043531
Tsu03g01095 660 PANTHER - 8 642 - -
Tsu03g01095 660 SUPERFAMILY L domain-like 448 632 - -
Tsu03g01095 660 PRINTS Disease resistance protein signature 143 158 - -
Tsu03g01095 660 PRINTS Disease resistance protein signature 223 237 - -
Tsu03g01095 660 PRINTS Disease resistance protein signature 321 335 - -
Tsu03g01095 660 PRINTS Disease resistance protein signature 574 590 - -
Tsu03g01095 660 Gene3D - 110 279 IPR027417 -
Tsu03g01095 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 384 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01095 Tsu-Chr3 10222359 10224341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01095 144 342 WRKY Transcription Factor Family AT5G45050 25.126 9.75e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01095 K13457 - gmx:100819372 624.394