Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01092 ATGTGTGATCCTTGTGCAACTGTAGATTCTTGTGTTCGTGACTTGCTTCCACTAGCCCGTGATCATTTGCTTCCAGTAGCTCGTAAATATTTGTTTCCAATAGCCCTTGATCATTTGCTTCCAATACTAAAGGAAACTGTCAACATGATTAGGGGTGTCCCAAATGACAAAATTGCAGAAATGAAAAATGAACTTGAAACCATTGAAGAGTTCATCCATCAAACAGATAAAATGGCTGATGCTGAAGAAGCCAACCCAAGTGATGAAACCAGAAAAAAGATCAAGCAGCTGATAGAAGCATCTTTTCGCATACAAGATCTCATTGATGAATACATCATCCGTGAAGAGCAACAACTTCCAGATCCTGGATGTGCTGCTGGTGCTTCTGACTATGTCAAAACTAAGATGCTCCGTCTCCAAATAGCCCATGATATTCAGAACATCAAATCCCAGATTAATGAAATGAAAGATATGAGTACTGGACAAGATCATGGCTTCCAAATCAAATCTTCTTCGGAACAAGGATCAAGCAGTTCTGCTATAAACCTGAATGCCACGTTGTTGCAGAACCTGCGAAAAGCTCCTTTTTACATGAAGGAAGCAGATGTTGTCGGCTTTGAAAAGCCAAGAGATAAATTGGTTGATTGGCTGGTAAAGGGAAGAGATGAGTTCACAGTCGTCTCTGTGGTAGCAATGGGAGGGCAAGGAAAAACCACTCTTGCTAGAAAAGTTTTTGACAGCAAAGAGGTCATGGAACACTTCGGTTATCGTGTATGGATCACAGTGTCACAACCATACAATATAGAAGAGTTGCTGAGAAAGCTGTTGAAGGAGCTTTGCGAACAACAAAAAGTCAACCCTCTTCAGAATATTCAAGAAATGAATAAAGAGTCATTATTGAAAGGAGTGAGATACTACTTGGAGGAGAAAAGGTACGTTGTAGTTTTTGATGATGTATGGGAGAAATCTTTTTGGGCTGATATTAAATATGCTATGAGTGATAATCAAAAAGGTTGTAGGATATTAATGACCACTAGGAACATGGATGTTGCCACTTCTTGTAGGGAATCTTCTTTTGTTGAAATTCATGAATTGAAACGTTTAGAAGATGAACAATCCTTAAAATTGTTCAATAAGAAGGCATTTTTTGACTTGGACGAAGTTTGTCCCGTAAATCTTATTGATATATCTTCCAAAATTGTTAAAAAGTGTGGTGGATTACCACTAGCAATTGTAGTCATTGGTGGTCAATTATCATgcaaaaatagaaatacaaTTCATGAATGGGATAAGTTTAATGAAAATATCAAGCCAAAGTTAAAGAAAGATTTTGTGATAAACACATTTTTAGTTCCCAGTTACCATGATTTGTCTTACAACCTCAAGTCATGTCTGTTATATTTTGGAATATATCCTGAAGACTGTGAAGTTAAATCCAAGAGACTAATTCGACAATGGATAGCTGAAGGATTCATAAAAGAGGAAGAGGGAatgacattggaagaggtggcAGAAGGATACTTAACAGAATTAATCCATAGAAGTTTGGTGCAAGTAGTTTCAATCAACATTAGAGGAAGAGCACAATTTTGTCGTGTTCATGATTTAGTGCATAATATGATCCTTAAAAAATGTGAGGATTTAAGTTTTTGCAAGAATATTAGTGAGGATGGCCAATCAGCTTTAAATGGAATAGTTCGACGCCTATCAATAAGGACCTATTCGGATAATATAATGGAAAGTATTGAAAGCTCGCAGGTTCGATCGTTGCTCGTTCCTAGACCTTACACATTAGATGAATCCGTTGTAAGGCAGATTACTACAAAATACAGGTTGTTGAAGGTGTTTGATGCTGAACTTGCTGGAGAAATTAAAGTTCCAGAAGATTTGGGAAGTTTGAACCACTTGAAGTATTTTAGTATCAAAGCAGCTGAACATGGAACTGCAGTTACTGCCCTTCCAAAATCCATTGGGATGCTTGAGAACCTAGAGACCTTGGATTTAGGATATACACTAGTCTTTGATATTCCCAAAGAAATTTGTAAACTTAGAAAGTTACGACATTTTCTAGGCTGCGAATTGAATTTGGTTCAACTGAAGGATGATATTGGAGGCATGACATCCCTACAAACTCTATGGCGGGTATGTTTaaatgaaaatgatgaagaCATAGAGGTAATCGAAGAGCTAGGAAAGCTGAAGCAACTAAAGGAATTTAACTTGAGAGGTGTCATGGGAAAACATATGAGTGTTTTATCTTCCTCAATCAATAAGATGCAACAAATGGAAAATCTATCTATTGATTCAGACGAAGATATTACTGATTTGGAATTGAATTTACCTAAGCTCCGATCTCTTGCACTGGCAGGTCTGTTGGTGAAGTTGCCAGAGTGGATTCCAAAGCATCAAAATCTTTTTCAACTGAGGCTTTATGCATCCAAACTAACAGAGGATCCAATGAAATTACTCAAAAGTATGCCAAACTTGTTGTCCATTACTCTCGGAGTAGATGCTTATGTAGGTGAAACCTTACATTTTCAAAATGAATGGTTTAAGAATTTGAAGGAACTATATCTTCTTGGGTTGCATGACTTGAAATCCATCCTTATTGACCAAGGTGCGTTGCCTTCTCTGGAAAAGCTCTCCTTACTCAGAGGACACCGACTCCGGAGGTTTCCAATTGGCATTCAACACTTAAAGAAGCTTGAAGATCTCTCTATTGCTTCGACAAGTGAGGAATTTACAGCGAACTTTTTACTGAATGGAGGAAAAGACCATTGGATCTTCAAACAAGTGCCCTCTGTACAAATTTATGATGTAAATGGCAAATCCATTTGA 2838 0.3689 MCDPCATVDSCVRDLLPLARDHLLPVARKYLFPIALDHLLPILKETVNMIRGVPNDKIAEMKNELETIEEFIHQTDKMADAEEANPSDETRKKIKQLIEASFRIQDLIDEYIIREEQQLPDPGCAAGASDYVKTKMLRLQIAHDIQNIKSQINEMKDMSTGQDHGFQIKSSSEQGSSSSAINLNATLLQNLRKAPFYMKEADVVGFEKPRDKLVDWLVKGRDEFTVVSVVAMGGQGKTTLARKVFDSKEVMEHFGYRVWITVSQPYNIEELLRKLLKELCEQQKVNPLQNIQEMNKESLLKGVRYYLEEKRYVVVFDDVWEKSFWADIKYAMSDNQKGCRILMTTRNMDVATSCRESSFVEIHELKRLEDEQSLKLFNKKAFFDLDEVCPVNLIDISSKIVKKCGGLPLAIVVIGGQLSCKNRNTIHEWDKFNENIKPKLKKDFVINTFLVPSYHDLSYNLKSCLLYFGIYPEDCEVKSKRLIRQWIAEGFIKEEEGMTLEEVAEGYLTELIHRSLVQVVSINIRGRAQFCRVHDLVHNMILKKCEDLSFCKNISEDGQSALNGIVRRLSIRTYSDNIMESIESSQVRSLLVPRPYTLDESVVRQITTKYRLLKVFDAELAGEIKVPEDLGSLNHLKYFSIKAAEHGTAVTALPKSIGMLENLETLDLGYTLVFDIPKEICKLRKLRHFLGCELNLVQLKDDIGGMTSLQTLWRVCLNENDEDIEVIEELGKLKQLKEFNLRGVMGKHMSVLSSSINKMQQMENLSIDSDEDITDLELNLPKLRSLALAGLLVKLPEWIPKHQNLFQLRLYASKLTEDPMKLLKSMPNLLSITLGVDAYVGETLHFQNEWFKNLKELYLLGLHDLKSILIDQGALPSLEKLSLLRGHRLRRFPIGIQHLKKLEDLSIASTSEEFTANFLLNGGKDHWIFKQVPSVQIYDVNGKSI 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01092 945 Pfam NB-ARC domain 207 442 IPR002182 GO:0043531
Tsu03g01092 945 SUPERFAMILY L domain-like 532 910 - -
Tsu03g01092 945 PANTHER - 59 909 - -
Tsu03g01092 945 Gene3D - 367 454 IPR042197 -
Tsu03g01092 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 468 IPR027417 -
Tsu03g01092 945 PRINTS Disease resistance protein signature 226 241 - -
Tsu03g01092 945 PRINTS Disease resistance protein signature 306 320 - -
Tsu03g01092 945 PRINTS Disease resistance protein signature 404 418 - -
Tsu03g01092 945 PRINTS Disease resistance protein signature 658 674 - -
Tsu03g01092 945 PANTHER DISEASE RESISTANCE PROTEIN RP 59 909 IPR044974 GO:0006952
Tsu03g01092 945 Gene3D - 188 362 IPR027417 -
Tsu03g01092 945 Gene3D - 455 545 IPR036388 -
Tsu03g01092 945 Gene3D Ribonuclease Inhibitor 577 940 IPR032675 -
Tsu03g01092 945 Pfam Rx N-terminal domain 35 118 IPR041118 -
Tsu03g01092 945 Gene3D - 34 158 - -
Tsu03g01092 945 CDD RX-CC_like 34 157 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01092 Tsu-Chr3 10193049 10195886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01092 227 423 WRKY Transcription Factor Family AT5G45050 29.412 7.34e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01092 K13457 - gmx:100819372 751.51