Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01086 ATGGATCTTGAAACACTTTACCCTTTCACccttttttccattttcttcttctccatcatTGTGACACTAAAACTAAAGAAGAAAATCAAGAAAGTAGACTCAATTCCAAATATACCCCCAGGGCCATGGAAGCTACCTATCATAGGAAATATAGCTAACCTTATTGGCTCTCCACCACATAGAAAATTAAGAGATTTAGCAAAAAAATATGGACCATTGATGCATCTTCAACTTGGTGAAGTCTTCTTTATCATTGTTACTTCAGCAGAATATGCTAAGGAAATAATGAAAACACATGATGTTATATTTGCATCAAGGCCTCATACGCTAAGCTCGGAGATAATATTTTATGATTCAACAGATATAGCTTTTGCTCCTTATGGTGAATATTGGAGACAACTTAGAAAGATTTGTACCGTTGAACTTTTAAGTATAAAACGCGTTCAATCGTTTTGGCCAATCAGAGAACAAGAGATGAATAATCTCGTCAAAACAATTGCTTCAGAAGAAGGAAGAGTCGTCAATCTTTCTCAACAAGTTGTGTCAATGATGTTTTCTGTCACATCAATGGCTGCATTTGGAAAAAAATACGCAGAGCAAGATGAGTTCATATCTGCGGTGAGAGAACTGATACTCCTAGCCAGTGGTTTCTACGTTGGAGACTTGTTTCCTTCGGCGAAATGGCTTCAAAACGTTACTGGAATGAGGCCTAAGCTTGAGAagttgcataaaaaaattgatagaatacTTGATATAATCATCAATGATCATAAAGAGAAAAAGTCAAGAACTAATAATTGTTTAGTTGAAGGAGAGGAAGATTTTATTGATGTTCTCTTAAAATTTGAGGATGGTAGCAGCAGTGATCTGGATTTTTACTTaactaagaaaaatataaaggCTATAATCTTTGACATTTTCATTGCTGGAAGTGACCAACCAGCAACTGCAATTATTTGGGCAATGGCGGAAATGATAAAGGATCCAAGAGTAATGAAGAAAGCACAAGCTGAAGTTAGAGCGATATTCCAAAAAAGAGGAAAAGTTGATGAAACATGCATTGATGAGTTAAAATACTTGAAAGCAATCATCAGGGAGGCTCTAAGATTGCATCCTCCTGGTGCTCTTTTATTACCAAGGGAGTCTGGACAAGCTTGTCAGATTGATGGTTATCACATACCAAAGAAAAGTAGGGTGATAATCAATGCTTGGGCGATTGGAAGGGATCCAAAATATTGGATAGAGCCAGAGAGATTTTATCCTGAAAGATTTATTGATGGTAATGTTAATTTTTACGGAACTAATTTTGAGTATATTCCGTTTGGTGCTGGAAGGAGAATTTGTCCAGGAATGAATTCTGCTATTGCAAATATTGAATTGGCTCTTGCTTTATTATTGTGTCACTTTGATTGGAAACTTCCCGGTGGAATGAAAAGTGAGGATTTGGATATGAATGAACTATTTGGAGTTTCTGTTACAAGAAAAGATCACTTGTACATAATTCCAACTATGCAAACCACCACATTTTTACAATGA 1536 0.3451 MDLETLYPFTLFSIFFFSIIVTLKLKKKIKKVDSIPNIPPGPWKLPIIGNIANLIGSPPHRKLRDLAKKYGPLMHLQLGEVFFIIVTSAEYAKEIMKTHDVIFASRPHTLSSEIIFYDSTDIAFAPYGEYWRQLRKICTVELLSIKRVQSFWPIREQEMNNLVKTIASEEGRVVNLSQQVVSMMFSVTSMAAFGKKYAEQDEFISAVRELILLASGFYVGDLFPSAKWLQNVTGMRPKLEKLHKKIDRILDIIINDHKEKKSRTNNCLVEGEEDFIDVLLKFEDGSSSDLDFYLTKKNIKAIIFDIFIAGSDQPATAIIWAMAEMIKDPRVMKKAQAEVRAIFQKRGKVDETCIDELKYLKAIIREALRLHPPGALLLPRESGQACQIDGYHIPKKSRVIINAWAIGRDPKYWIEPERFYPERFIDGNVNFYGTNFEYIPFGAGRRICPGMNSAIANIELALALLLCHFDWKLPGGMKSEDLDMNELFGVSVTRKDHLYIIPTMQTTTFLQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01086 511 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 Pfam Cytochrome P450 39 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Tsu03g01086 511 Gene3D Cytochrome P450 33 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PANTHER CYTOCHROME P450 71B11-RELATED 11 506 - -
Tsu03g01086 511 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 11 506 - -
Tsu03g01086 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01086 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01086 Tsu-Chr3 10103328 10105185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01086 14 507 Cytochrome P450 AT3G26310 39.321 9.93e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01086 - - mtr:MTR_3g058060 770.385