Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01084 ATGCAGCTATCAAGTGGTTTCTACATTGGAGACTTGTTTCCTTGGGTGAAATGGCTTAAAAACATTACTGGAATGAGGTCTAAGCTTGAGAAGGTGCACCGAAATATTGATAGAATACTTGAGATGATTATCGATGATCATAAAGAAACAAAGtcaagaactaaagattatttaGTTGAAGGAGAGGAAGATTTGATTGATGTTCTCTTGAAATTTGAAGATGGCAATTATCAAGAGATTTTAAGAATTCACCCTCGAGTTTCTCTTTTACTTCCAAGGGAGTCTGGACAAGCTTGTGAGATCGATGGATATCACATACCAATCAAAAGTAAGGTAATAATCAACGTATGGGCGATTGGAATGGATCCAAAATATTGGACGAAGCCAGAGAGATTTATTGATAGTTCTATTGATTTTAAAGAAACTAATTTTAAGTATATTCCGTTTGGTGCTGGAAGAAGAATTTGTCCAAGCATAAATTACAGTATGGCAAATGTTGAATTGGCCCTTGCTTTGTTGTCGTGTCACTTTGATTGGAAACTTCCGGATGGAACTAAATTCTGA 564 0.3493 MQLSSGFYIGDLFPWVKWLKNITGMRSKLEKVHRNIDRILEMIIDDHKETKSRTKDYLVEGEEDLIDVLLKFEDGNYQEILRIHPRVSLLLPRESGQACEIDGYHIPIKSKVIINVWAIGMDPKYWTKPERFIDSSIDFKETNFKYIPFGAGRRICPSINYSMANVELALALLSCHFDWKLPDGTKF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01084 187 PANTHER CYTOCHROME P450 71B11-RELATED 2 79 - -
Tsu03g01084 187 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 79 - -
Tsu03g01084 187 PRINTS E-class P450 group I signature 156 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01084 187 PRINTS E-class P450 group I signature 74 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01084 187 PRINTS E-class P450 group I signature 146 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01084 187 PRINTS E-class P450 group I signature 115 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01084 187 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 78 186 - -
Tsu03g01084 187 Pfam Cytochrome P450 78 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01084 187 Gene3D Cytochrome P450 76 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01084 187 Gene3D Cytochrome P450 1 75 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01084 187 SUPERFAMILY Cytochrome P450 6 186 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01084 187 PANTHER CYTOCHROME P450 71B11-RELATED 78 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01084 Tsu-Chr3 10092587 10094227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01084 62 186 Cytochrome P450 AT3G26230 49.231 1.07e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01084 - K23806 mtr:MTR_3g058060 179.874