Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01082 ATGGATCTTCAAATCCTATACTTTACATCCATTTTCTCCcttttcatttttgtgttcatagCAAAAAAAATAGTGACCAAGAAATCTAACTCAACTCCAAATTTACCACCAGGTCCATTGAAGCTACCTATCATAGGAAACATACACAACCTTATAGGTGCACTTCCCCATCATAAGCTAAGAGACTTATCAAACAAATATGGACCTTTAATGCATCTAAAGCTTGGTGAAGTTTCAACAATTGTGGTTTCATCAGCTGAATATGCAAAAGAAGTGATGAAAAATCATGATCTTGTCTTTGCATCAAGGCCTCATATTCAAGCTTCAAAGATAATGGGTTATAACTCTCTTGGTATTGCTTTTGCACCTTATGGTGATTATTGGAgacaacttaaaaaaatttgtactttaGAGTTATTAAGTTCGAAACGTGTCCAATCTTTTCAACCAATTAGAAGTGAAGAGgtaaataatttaatcaaatggATTACTTCAAAAGAAGgaatacaaattaattttactaaagAAGTGTTTTCAACAATTTCTACAATCACTTCTAGGACAGCTTTTGGAAAAAAGTGCAAGGAAAATCAGAAATTTATATCATTGGTAAGGAAAGCTATTAAGATTGCTGGTGGTTTTGAGTTGGGAGATTTGTACCCTTCTTATAAATGGCTTCAACATTTATCTGGATTGAAGCCTAAGCTTGAAAAGTTACACAAAGAAGCTGATTTGATTATGCAAAACATTATTGATGAGCATAGGGAGGTTAATGAATCAAGGGCTAGTGAAAATCATGGTGATGAAGTGGAGGAATATCTTGTAGATGTGCTATTGAAGCAGGATTGTTTGAGTGATAATAGTGTCAAGGCTGTGATCTTGGATATATATGGAGGTGGAAGTGAGACATCAGCTACTACCATAACATGGGCAATGGCAGAGAtgataaaaaatccaaaaataatgcAGAAAGTTCAAGCTGAGGTAAGAGAGGTTTTTGATAAACAAAGAAAACCCAATGAAAGTGACATTGAGAATTTAAAATGTGTTGTGAAAGAGACATTGCGATTGCACCCGCCTGCTACATTTTTGCTTCCAAGAGAATGTGGACAAGAatgtaagataaatggatatgaTATACCTTTTAAAAGTAAAGTGATAGTGAATGCTTGGGCGATTGGAAGAGATCCAAATTATTGGGCTGATCCAGAGAGGTTTTTTCCTGAAAGGTTTATTGAAAGTTGTGTAGACTATAGGGGTAATAATTTTGAGTTTGTTCCATTTGGTGCCGGTAGAAGAATGTGCCCGGGAATCACATTTGGTATGGTCAATGTTGAGTATCCACTTGCAGTGTTGATGTATCACTTTGATTGGAAACTTGCCAATAGATTGAAAAATGAAGATTTAGACATGAGTGAGACTTTTGGATCAGCGGTTGCTCGAAAAGATGATTTATACCTTATTCCTATCACTTATCATCCTTAA 1485 0.33 MDLQILYFTSIFSLFIFVFIAKKIVTKKSNSTPNLPPGPLKLPIIGNIHNLIGALPHHKLRDLSNKYGPLMHLKLGEVSTIVVSSAEYAKEVMKNHDLVFASRPHIQASKIMGYNSLGIAFAPYGDYWRQLKKICTLELLSSKRVQSFQPIRSEEVNNLIKWITSKEGIQINFTKEVFSTISTITSRTAFGKKCKENQKFISLVRKAIKIAGGFELGDLYPSYKWLQHLSGLKPKLEKLHKEADLIMQNIIDEHREVNESRASENHGDEVEEYLVDVLLKQDCLSDNSVKAVILDIYGGGSETSATTITWAMAEMIKNPKIMQKVQAEVREVFDKQRKPNESDIENLKCVVKETLRLHPPATFLLPRECGQECKINGYDIPFKSKVIVNAWAIGRDPNYWADPERFFPERFIESCVDYRGNNFEFVPFGAGRRMCPGITFGMVNVEYPLAVLMYHFDWKLANRLKNEDLDMSETFGSAVARKDDLYLIPITYHP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01082 494 Gene3D Cytochrome P450 28 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 Pfam Cytochrome P450 36 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PANTHER CYTOCHROME P450 71B11-RELATED 8 493 - -
Tsu03g01082 494 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 PANTHER CYTOCHROME P450 71D9 8 493 - -
Tsu03g01082 494 SUPERFAMILY Cytochrome P450 36 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01082 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01082 Tsu-Chr3 10075796 10077578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01082 5 492 Cytochrome P450 AT3G26300 42.346 5.32e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01082 - K13267 gmx:100813216 718.768