Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01081 ATGGCTCCATTAGTCCTCTACTTTGCATATCTTTTCTCCTTTGTCCTCTTAACCCTTATGGTACAAAAGataagaaagaagaaaagttACTCAACTTTTAACTTACCACCAGGACCTAGAAAGCTACCTATTATAGGAAATATACACAATCTGTTAAGCTCTCAACCCCATCAGAGATTGAGAGACTTGGCCAAGAAATATGGACCTGTAATGCATCTTCAACTTGGAGAGGTTTCTACTGTTGTCATTTCATCACCCGAGTGTGCTAGGGAGGTGATGAAAACCCACGATATTCACTTTGCAACAAGGCCTCACATCCTAGCTACAGAAATAATGTCTTACAATTCCACAAGTATAACTTTTTCTCCTTATGGTGATTACTGGAGACAGCTACGAAAAATCTGCACATTGGAGCTTTTAAGCCTAAAAAGGGTCAACTCATACCAACCAATTAGAGAAGAAGTGCTTTCCAATCTTGTCAAGTGGATTGCTTCACAGAACGGATCGCCAATTAATTTAACTGAAGCTGTACTTTCTTCAATATACACAATAGTTTCGAGGACAGCCTTTGGGAAATGCAAAGACCAAGAAAAATTTATATCAGTGATAAAACAAGCAGTAAAAGTTGCAGCGGGTTTTAATTTGGGAGATTTGTTTCCCTCAGCTAAATGGCTACAGCATGTTACTGGTTTGAGGCCTAAGCTTGAAAGGTTTCAGAAACAAACTGATCAGATATTAGAAAACATCATCAATGAGCATAAAGAGGAAAAgtttacaaaagaaaaacatgatcAAGGTGAAGTAGAAGATCTGGTAGATGTTCTCTTGAATTATGAGGATGGTAGCAACCAGGATTTTTCCTTAACAAATAACAATATCAAGGCCATAATCTTGGATATCTTCACTGGTGGAAGTGACACAGCAGCAACTACAATTAATTGGGCAATGGCTGAGATGATCAAGGATCAAAGAATATTGAAGAAAGCACAAATTGAAGTGAGAGAGATATTCAAAAAAGCAGGAAAAGTTGATGAAACATGCATTGATGAGTTAAAATACTTAAAAGCAATAATCAAAGAAGTTCTAAGAATGCACCCTCCTGGCCCACTTTTAATTCCAAGGGAGTGTGGACAAGCTTGTGAGATTGACGGATATCACATACCAATCAAAAGTAAGGTAATAATCAACGCTTGGGCGATTGGAATGGATCCAAAATATTGGACCGAGCCAGAGAAGTTTTATCCAGAAAGGTTTATTGATAGTTCTATTGATTTTAAAGGAACTAATTTTGAGTATATTCCGTTTGGTGCTGGAAGGAGGATTTGTCCGGGTATAAATTATGGTTTGGCAAATGTTGAATTGGCACTTGCTATGTTATTGTGTCACTTTGATTGGAAGCTTCCGAGTGGAATGAAAAGTGAGGATTTGGATATGACTGAGCTATTTGGTGCATCtgttataagaaaaaatgaCTTGTACTTGATTCCAAGCACTTATCCTTTATTGGAGTAG 1512 0.3651 MAPLVLYFAYLFSFVLLTLMVQKIRKKKSYSTFNLPPGPRKLPIIGNIHNLLSSQPHQRLRDLAKKYGPVMHLQLGEVSTVVISSPECAREVMKTHDIHFATRPHILATEIMSYNSTSITFSPYGDYWRQLRKICTLELLSLKRVNSYQPIREEVLSNLVKWIASQNGSPINLTEAVLSSIYTIVSRTAFGKCKDQEKFISVIKQAVKVAAGFNLGDLFPSAKWLQHVTGLRPKLERFQKQTDQILENIINEHKEEKFTKEKHDQGEVEDLVDVLLNYEDGSNQDFSLTNNNIKAIILDIFTGGSDTAATTINWAMAEMIKDQRILKKAQIEVREIFKKAGKVDETCIDELKYLKAIIKEVLRMHPPGPLLIPRECGQACEIDGYHIPIKSKVIINAWAIGMDPKYWTEPEKFYPERFIDSSIDFKGTNFEYIPFGAGRRICPGINYGLANVELALAMLLCHFDWKLPSGMKSEDLDMTELFGASVIRKNDLYLIPSTYPLLE 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01081 503 Pfam Cytochrome P450 36 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Tsu03g01081 503 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 501 - -
Tsu03g01081 503 Gene3D Cytochrome P450 29 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 SUPERFAMILY Cytochrome P450 36 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PANTHER CYTOCHROME P450 71B11-RELATED 8 501 - -
Tsu03g01081 503 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01081 503 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01081 Tsu-Chr3 10029137 10074656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01081 10 499 Cytochrome P450 AT3G26300 41.916 9.79e-141 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01081 - - gmx:100778040 736.102