Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01080 ATGCATCTTCAACTTGGAGAGGTTTCAAATATTGTCATTTCATCACCCGAGTGTGCTAGCGAGGTGATGAAAACCCATGACATTCACTTTGCAACAAGGCCTCAAATCCTAGCTACAGAAATAATGACTTACAACTCTACAAGTATAGCTTTTTCGCCTTATGGTAATTATTGGAGACAGTTACGAAAAGTATGCACATCGGAGCTTTTAAGCTTAAAAAGGATCAATACGTACCATCCAATCAGAGAAGACGTGCTCTCCAATCTTGTCAAATGGATTGCTTCACAGAATGGATCGCCAATAAACCTCACGGAAGCTGTAATTTCTTCAATATACACCATTGTTTCGAGGGCTGCCTTTGGAAATAAATACAAAGACCAAGAAAAGTTTATATCAGTgataaaagaaacaataaagGTTTCCGCAGGTTTTAACTTAGCAGATTTGTTTCCTTCTGCTAAATGGCTACAACATGTTACTGGTTTGAGGCCTAAGCTTGAGAGTTTTTATCGACAAACTGATCAGATGTTTGAAAACATAATCAATGACCATAAAGTGGCAAAATATGCAAAAGGCAAAGATGATCAAGGTGTAGAAGAAGATCTGGTAGATGTTCTCTTAAAATACGAGGATGGTCGCAACCAAGACTTTTCCTTAACAAAAGACAATATCAAGGCCATAATCATGGACATGTTCGGTGCTGGAACCGAGACATCCGCAAACACCATAGATTGGGCAATGGTAGAAATGGTAAGAGATCCAAGAATAATGAAGAAAGCACAAGCTGAGGTGAGAGAGCTTTTCAAAATGAAAGGAAGTGTTGATGAAAATTGCATCAATGAACTCAATTATTTGAAATCAGTAGTCAAAGAAACCTTAAGGCTACACCCTCCAGCAGCTCTTATAGCAAGAGAATGTGGTCAAGCATGTGATATAAATGGTTATCACATTCCGATTAAGACTAGGGTGCTGATTAATGTCTGGGCAATTGCAAGAGATCCAACCTACTGGACGGAACCAGAGAAGTTTTATCCAGAGAGATTCATTGACAGCACTATTGACTATAAAGGAAGTAATTTTGAGTATATTCCTTTTGGTGCTGGAAGAAGAATATGCCCGGGGAGCACATTTGGATTGAGAAATATTGAGCTGGCCCTTGCAACGTTGTTGTATCATTTTGATTGGAAGCTTCCCAGTGGAATCAGAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTTACATTGAGAAGAAAAGATGACCTTTTATTGGTACCTTTTTCTTATCATCCTTTGTCTGTCCAGTGA 1308 0.3838 MHLQLGEVSNIVISSPECASEVMKTHDIHFATRPQILATEIMTYNSTSIAFSPYGNYWRQLRKVCTSELLSLKRINTYHPIREDVLSNLVKWIASQNGSPINLTEAVISSIYTIVSRAAFGNKYKDQEKFISVIKETIKVSAGFNLADLFPSAKWLQHVTGLRPKLESFYRQTDQMFENIINDHKVAKYAKGKDDQGVEEDLVDVLLKYEDGRNQDFSLTKDNIKAIIMDMFGAGTETSANTIDWAMVEMVRDPRIMKKAQAEVRELFKMKGSVDENCINELNYLKSVVKETLRLHPPAALIARECGQACDINGYHIPIKTRVLINVWAIARDPTYWTEPEKFYPERFIDSTIDYKGSNFEYIPFGAGRRICPGSTFGLRNIELALATLLYHFDWKLPSGIRSEELDMTEEFGVTLRRKDDLLLVPFSYHPLSVQ 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01080 435 Gene3D Cytochrome P450 1 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS P450 superfamily signature 234 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS P450 superfamily signature 287 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS P450 superfamily signature 363 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 432 - -
Tsu03g01080 435 Pfam Cytochrome P450 3 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS E-class P450 group I signature 326 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS E-class P450 group I signature 110 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS E-class P450 group I signature 286 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS E-class P450 group I signature 372 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PRINTS E-class P450 group I signature 362 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 365 374 IPR017972 GO:0005506|GO:0016705
Tsu03g01080 435 SUPERFAMILY Cytochrome P450 2 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01080 435 PANTHER CYTOCHROME P450 71B11-RELATED 1 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01080 Tsu-Chr3 10026054 10027556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01080 1 426 Cytochrome P450 AT3G26210 43.508 1.22e-122 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01080 - - gmx:100778040 687.567