Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01079 ATGGCTTTACTAGTTTTCTACTTGCAAATTTTTCTCTCCTTTGTTCTCTTGGCCCTTGttgtacaaaaaataagaaagaagcTCATGAAAACTAACTCAACTTTTAACCTCCCTAAAGGGCCTAGAAAGTTACCTATTATAGGAAACATACACGATGTGTTAAGCACTAAGCCATATCGAAAACTAAGAGACTTGGCCAGAGAATATGGACCCTTAATGCATCTTCAGCTTGGAGAGATTTCAACTATTGTCATTTCATCACCTGACAATGCTAGGGAGGTGATGAAAACTCATGATATTAACTTTGCAATAAGGCCTCAAATCATAGCTTCAGAATTAATAACTTATAATTCCACAGGAATAATTTCTGCTCCTTATGGTAATTATTGGAGACAACTGCGAAAAATTTGCACATTAGAGCTTTTGAGCCTAAAACGTGTCAACTCGTACCAGCCAATTCGAGAAGAAGAGCTCTCTAATCTTGTAAAATGGATTGCTTCAAAGAATGGATCACCTATCAACCTCACTCAAGCTGTACTTTCTTCAATGTACACCATTGTGTCAAAAGCTGCGTTCGGCAAGAAATGCAGAAACCAGGAACAATTTATATCAGCagcaaaagaatcaataaaGATTGCAGGAGGTTTTGACTTAGCAGATTTGTTTCCCTCAATTACATGGTTGCGTTATGTTACTGGTTTAAGTCGTAAGCTTGAGAGGGTGCATCGACAGATTGATCAAATAATGGAAAACATAATCAGTGAGCACAAAGAGGCTAATAAACAAAGTGAATCGAACAAAGATCTCGTAGATGCTCTCATGAAATATGAAGATGGTAACAAACAGGAATTTGTCTTAACTACAAACAATATCAAGGCCATAATCCTGGACATTTTCGGTGCTGGAGGTGAGACATCAGCAATCACCATAGATTGGGCAATGGTAGAAATGATAAGGAATCCAAGAATAATGAAGAAAGCACAAACTGAGGTGAGAGAGGTTTTCAAAATGAAAGGAAGGGTTGATGAAAAATGCATCAATGAACTCAATTATTTGAAATTAGTTGTCAAAGAAACTCTGAGGTTATACACTCCAGCACCTCTTTTGCTACCAAGAGAATGTGGTCAAGCATGTGAGATAAATGGTTATCACATACCGATTAAGACTATGGTGATAGTCAATGCATGGGCAGTTGCACGAGATCCAAACTACTGGACCGAACCAGAAAGGTTTTATCCAGAGAGATTCATGGACAACACTATTGACTATAATGGGAGTAATTTTGAGTACATTCCTTTTGGTGCTGGACGAAGAATATGTCCAGGAAGCATATTTGGTTTGAGAAATGTTGAGCTGGCACTTGCAATGTTGTTGTATCATTTTGATTGGAAGCTTCCTAGTGGAATTAGAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTCACAATGAGAAGAAAAGATGATCTTTTAttattaccttttttttatcatcctTTGCCTTAA 1506 0.3632 MALLVFYLQIFLSFVLLALVVQKIRKKLMKTNSTFNLPKGPRKLPIIGNIHDVLSTKPYRKLRDLAREYGPLMHLQLGEISTIVISSPDNAREVMKTHDINFAIRPQIIASELITYNSTGIISAPYGNYWRQLRKICTLELLSLKRVNSYQPIREEELSNLVKWIASKNGSPINLTQAVLSSMYTIVSKAAFGKKCRNQEQFISAAKESIKIAGGFDLADLFPSITWLRYVTGLSRKLERVHRQIDQIMENIISEHKEANKQSESNKDLVDALMKYEDGNKQEFVLTTNNIKAIILDIFGAGGETSAITIDWAMVEMIRNPRIMKKAQTEVREVFKMKGRVDEKCINELNYLKLVVKETLRLYTPAPLLLPRECGQACEINGYHIPIKTMVIVNAWAVARDPNYWTEPERFYPERFMDNTIDYNGSNFEYIPFGAGRRICPGSIFGLRNVELALAMLLYHFDWKLPSGIRSEELDMTEEFGVTMRRKDDLLLLPFFYHPLP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01079 501 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 499 - -
Tsu03g01079 501 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 Coils Coil 231 251 - -
Tsu03g01079 501 Pfam Cytochrome P450 38 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 SUPERFAMILY Cytochrome P450 38 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Tsu03g01079 501 Gene3D Cytochrome P450 28 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01079 501 PANTHER CYTOCHROME P450 71B11-RELATED 8 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01079 Tsu-Chr3 10022703 10024781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01079 10 494 Cytochrome P450 AT3G26310 42.857 1.37e-141 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01079 - - gmx:100808862 735.717