Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01078 ATGGCTCAATTAATCTTCTATTTAGCatattttttctcctttgtcCTCTTAACCCTTATGGTACAAAGGAtaagaaagaagaaaacttgCTCAACTTATAAAATACCAAGAGGGCCTAGAAAGCTACCTATTATAGGAAATATACACAACCTGTTAAGCCCTCAACCCCATCGAAAATTAAGAGACTTGGCCAAAAAGTATGGACACGTCATGCATCTCCAACTTGGAGAGGTTTCTACTATTGTCATTTCATCATCCGAGTGTGCTAGGGAGGTGATGAAAACTCATGATATTCACTTTGCAACAAGGCCTCAAATCCTAGCAACAGAAATAATGTCTTACAATTCAACAAATATCGCTTTCGCTCCTTATGGTAACTATTGGAGACAGTTGCGAAAAATCTGCACATTAGAGCTTTTAAGCCTAAAAAGGGTAAATTCATACCAACCAATTAGAGAAGAGGTGCTCTCGGATCTTATTAAATGGATTGCTTCACAGAATGGAGCACCAATCAACCTCACTGAAGCTGTACTTTCTACTATATACACAATTGTTTCAAGGGCCGCCATTGGGAATACATGCAAAGACCAAGAAAAATTTATATCAGTGGTAAAACAAACATTAAAGGTTGCAGCAGGTTTTGACTTGGGAGATTTGTATCCTTCTTCTAAATGGCTACAACGTGTTACTGGTTTGAGGCCTAAGCTTGAGAAGTTACAACGACAAACTAATCAGATATTAGAAAACATCATCAATGAGCATAAAGAGGCGAAGTACACAAAAGCCAAAGCTGATCATGGTGAAGTAGACGAAGACCTTTTAGACGTTCTCTTAAAATATGAGGATGGTAGCAACCAGGATTTCTCCTTAACTAAAAACAATATCAAGGCCATAATCCTGGACATTTTTGGTGCCGGAGGTGAGACATCAGCAAGCACCATAGATTGGGCAATGGCAGAAATGATAAGGGATCCAAGAACAATGAAAAAAGCACAAGCTGAGGTGAGAGAGGTTTTCAAAATGAAAGGAAGGGTTGATGAAAATTACATCAACGAGCTCCATTATTTGAAATCAGTTGTCAAAGAAACTCTGAGGTTACACCCTCCACTACCACTTTTGCTACCAAGAGAATGTGGTCAAGCATGTGAGATAAATGGTTATCACATACCGATTAAGACTAAGGTGATAGTTAATGCTTGGGCAATTGCAAGAGATCCAAACTATTGGACCGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGACAACACTATTGATTATAAAGGGAGTACTTTTGAGTATACTCCTTTTGGTGCTGGAAGAAGAATATGTCCGGGGAGCACATTTGGTTTGAGAAATATTGAGCTAGTTCTTGCGATGTTGTTGTATCATTTTGACTGGAAGCTTCCAAGTGGAATCAGAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTCACAGTGCGAAGAAAAGATAATCTCTTATTGGTTCCTTCTATTTTTCATCCTTTGCATGTCACATGA 1524 0.3793 MAQLIFYLAYFFSFVLLTLMVQRIRKKKTCSTYKIPRGPRKLPIIGNIHNLLSPQPHRKLRDLAKKYGHVMHLQLGEVSTIVISSSECAREVMKTHDIHFATRPQILATEIMSYNSTNIAFAPYGNYWRQLRKICTLELLSLKRVNSYQPIREEVLSDLIKWIASQNGAPINLTEAVLSTIYTIVSRAAIGNTCKDQEKFISVVKQTLKVAAGFDLGDLYPSSKWLQRVTGLRPKLEKLQRQTNQILENIINEHKEAKYTKAKADHGEVDEDLLDVLLKYEDGSNQDFSLTKNNIKAIILDIFGAGGETSASTIDWAMAEMIRDPRTMKKAQAEVREVFKMKGRVDENYINELHYLKSVVKETLRLHPPLPLLLPRECGQACEINGYHIPIKTKVIVNAWAIARDPNYWTEPERFYPERFIDNTIDYKGSTFEYTPFGAGRRICPGSTFGLRNIELVLAMLLYHFDWKLPSGIRSEELDMTEEFGVTVRRKDNLLLVPSIFHPLHVT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01078 507 Coils Coil 236 256 - -
Tsu03g01078 507 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 503 - -
Tsu03g01078 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 Pfam Cytochrome P450 36 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Tsu03g01078 507 SUPERFAMILY Cytochrome P450 36 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 Gene3D Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01078 507 PANTHER CYTOCHROME P450 71B11-RELATED 8 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01078 Tsu-Chr3 10010247 10017675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01078 10 500 Cytochrome P450 AT3G26310 42.800 5.04e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01078 - - gmx:100778572 764.222