Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01077 ATGGCTCTACTAGTCCTCTACTTATCATTTCTTATCTCCTTTGTTTTCTTGGCCCTTGTTGTACAAAAAGTAGGAAAGAAGCTCAAGAAAACAGACTCAACTTATAACCTTCCTAAAGGGCCTAGAAAGCTACCAATTATAGGAAATTTACACAATCTGATTAGCTCTCAACTACATCAAAAACTAAGAGACTTAGCCAGAAAATATGGACCCTTAATGCATCTTCAACTTGGAGAGATTTCAACTATAGTCATTTCATCACCACACTATGCGAAGGAGGTGATGAAAACTCATGATATTAACTTTGCAATAAGGCCTAAAGTCCTAGCTTCAGATTTAATTGCTTATAACTCCAAAGGTATAATTTCTGCTCCTTATGGTAATTATTGGAGAGAGTTAAGAAAAATTTGCACATTGGAGCTTTTGAGCCTAAAACGCGTCAACTCATACCGACCAATTAGAGAAGAAGAGCTCGCTAATCTTGTCAAATGGATTGCGTCGCAGAATGGATCACCGATCAACCTTACTCAAGCTATAATCTCTTCAGTATACACCATTGTTTCAAAAGCTGCATTTGGTAAGAAGTGTAAAGACCAAGAAAAATTCATATCAGCATTGAAAGAATTGTTAAAGATTGGAGGAGGTTTTGACTTAGCAGATTTGTTTCCTTCTATTACATGGTTGCATTATTTTACTGGTTTAAGGCCTAAACTTGAGAGGGTGCATCGATTGATTGATCAAATAATGGAAAACATCATCAATGAGCACAAAGAGGCCAAGTCAAAAGCCAAATATGAGCAAGGAGGTGAACTAGATGAAGATTTAATAGATGTTCTAATAAAATATGAAGATGGCATCAGCAAGGAATTTTTCTTATCTACAGACGATATCAAGGCCATAATCCTGGACATTTTTGGTGCTGGAGGTGAAACATCAGCAAACACCATAGATTGGGCAATGGTAGAAATGGTAAGGAATCCAAGAATAATGAAGATAGCACAAACTGAGGTTAGAGAGATTTTCAAAATGAATGGAAGAGTCGACGAAAGTCGCATCAATGAACTCAATTATTTGAAGTTAGTAGTCAAAGAAACCTTAAGATTACACCCTCCAGCACCTCTTTTGTTACCAAGAGAATGCGGTCAAGCATGTGAGATAAATGGTTATCACATACCGATTAAGACTAAGGTGATAGTCAATGCTTGGGCGATTGCAACAGATCCAAACTACTGGACTGAACCAGAGAGATTTTATCCGGAGAGATTCATTGACAGTACTGTTGACTATAAAGGAAATAATTTCGAGTATATTCCTTTTGGTGCTGGAAGAAGAATATGTCCTGGTAGCATATTTGGCTTGAGAAGTGTTGAGCTGACTCTTGCAACATTGTTGTATCATTTTGATTGGAAGCTTCCGAATGGAATTAAAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTTacaatgagaagaaaaaatgatcTTTTAGTGTTCCCTTTTCCTGTCATGTGA 1515 0.3657 MALLVLYLSFLISFVFLALVVQKVGKKLKKTDSTYNLPKGPRKLPIIGNLHNLISSQLHQKLRDLARKYGPLMHLQLGEISTIVISSPHYAKEVMKTHDINFAIRPKVLASDLIAYNSKGIISAPYGNYWRELRKICTLELLSLKRVNSYRPIREEELANLVKWIASQNGSPINLTQAIISSVYTIVSKAAFGKKCKDQEKFISALKELLKIGGGFDLADLFPSITWLHYFTGLRPKLERVHRLIDQIMENIINEHKEAKSKAKYEQGGELDEDLIDVLIKYEDGISKEFFLSTDDIKAIILDIFGAGGETSANTIDWAMVEMVRNPRIMKIAQTEVREIFKMNGRVDESRINELNYLKLVVKETLRLHPPAPLLLPRECGQACEINGYHIPIKTKVIVNAWAIATDPNYWTEPERFYPERFIDSTVDYKGNNFEYIPFGAGRRICPGSIFGLRSVELTLATLLYHFDWKLPNGIKSEELDMTEEFGVTMRRKNDLLVFPFPVM 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01077 504 Pfam Cytochrome P450 38 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 Gene3D Cytochrome P450 30 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 502 - -
Tsu03g01077 504 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01077 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Tsu03g01077 504 PANTHER CYTOCHROME P450 71B11-RELATED 8 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01077 Tsu-Chr3 9997664 10001536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01077 10 500 Cytochrome P450 AT3G26310 40.200 1.62e-133 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01077 - - gmx:100778572 748.814