Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01062 ATGTCTTTCTCTCTTAGAATCATTTtcttattctctcttctcttccttctcttcttctcctctgTTTCTTCCCACGGTGGCAGCGACAACGGCGACGACGACGCTGCAGCCACTGTCAACCTCCGTTCAAAATCATTAATCCTTGCAAAAATTTGGTgcttaattttgatttttttagctACTTTCATTGCTGGTATTTCACCTTATGCATTGAGATGGAATGAAGGGTTCTTGATTTTAGGGACACAGTTTGCTGGTGGAGTGTTTCTAGGAACTGCTTTGATGCATTTTTTGAGTGATGCAAATGAAACTTTTGGTGATTTGACTGATAAAGAGTACCCTTTTGCTTTCATGTTGGCTTGTGTTGGTTATTTGATTACTATGCTTGCTGATTGTgttatttcttctcttttggAAAAGCCTCATGGTGCTGCTGATGTTGAAGTTCAAGTTGCAGGGTCAGACAAAAGAAGGAGCAATGATGTTACTTCTCAGTCAAAATATCAGGGTTCTTCTGAAACCAATGATCATGATCATGTATGTAGTACTTCAATGGGAGATAATgtatacatatttatttatgtatacaTAATCGCTCTTTGTGCTCATTCAGTTTTCGAGGGTTTAGCAATTGGAATTTCCGAGACAAAAGCAGACGCTTGGAAAGCTTTATGGACAATCTGTTTGCACAAGATATTTGCAGCCATTGCTATGGCCATTGCGCTCCTCCGGATGGCTCCTAACCGATCTCTACTATCGGTTGCAGCCTATGCTTTCGCCTTTGCGATATCTAGTCCAATTGGTGTTGCCATTGGGATTGTATTAGATTCCACAACACAAGGTCATGCCGTTGATTGGACTTTCGCTATATCTATGGGTTTAGCTTGTGGTGTGTTTATTTATGTATCAATAAACCATCTATTTGCAAAGGGTTATGTGGCTCAAAAACATACAAAGGTTGATTCAGCCTATATGAAATTTCTTGCAGTGTCGTTGGGAATAGGAGTTATAGCTGTTGTTATGATATGGGATACCTAA 1038 0.3642 MSFSLRIIFLFSLLFLLFFSSVSSHGGSDNGDDDAAATVNLRSKSLILAKIWCLILIFLATFIAGISPYALRWNEGFLILGTQFAGGVFLGTALMHFLSDANETFGDLTDKEYPFAFMLACVGYLITMLADCVISSLLEKPHGAADVEVQVAGSDKRRSNDVTSQSKYQGSSETNDHDHVCSTSMGDNVYIFIYVYIIALCAHSVFEGLAIGISETKADAWKALWTICLHKIFAAIAMAIALLRMAPNRSLLSVAAYAFAFAISSPIGVAIGIVLDSTTQGHAVDWTFAISMGLACGVFIYVSINHLFAKGYVAQKHTKVDSAYMKFLAVSLGIGVIAVVMIWDT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01062 345 MobiDBLite consensus disorder prediction 156 176 - -
Tsu03g01062 345 MobiDBLite consensus disorder prediction 155 176 - -
Tsu03g01062 345 PANTHER ZINC TRANSPORTER 11 29 344 - -
Tsu03g01062 345 PANTHER ZINC/IRON TRANSPORTER 29 344 - -
Tsu03g01062 345 Pfam ZIP Zinc transporter 48 340 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01062 Tsu-Chr3 9887807 9890009 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01062 24 345 Inorganic Solute Cotransporters AT1G55910 58.258 6.59e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01062 K14709 - gmx:100791239 442.195