Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01048 ATGGTCGATCAGTGTACATCAAAGTTCATAAGTTGGATAACCGAAAAAGCCAATCAGCGTTGTCAAAGCGAGTCAAGAACAAAATTGGGTGCAGATGACCTATTGTGGGCTTTGAAAACTGTAGGTTATCATGACTATTTTAGACCTCTCGACTTTTATCTCAAACGCTACCGCTATAGTAATGAGATTGAGTCTATGCAACTATTTGGTGAGAACCCTAAATCCACCTCATCAGCTTTTGAGATATCTCATCCATCCCCACCACCACCAAACCCACTTTTTGAACTGGTTGAAGCAATGAAGATGGATGAATTTTGGGCTGAATTGGATAATAAGAGTTCTGGTTCCACAGACAATGCTTCGACCACCATTGATCCTTCTACTTAA 387 0.4057 MVDQCTSKFISWITEKANQRCQSESRTKLGADDLLWALKTVGYHDYFRPLDFYLKRYRYSNEIESMQLFGENPKSTSSAFEISHPSPPPPNPLFELVEAMKMDEFWAELDNKSSGSTDNASTTIDPST 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01048 128 MobiDBLite consensus disorder prediction 109 128 - -
Tsu03g01048 128 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 86 IPR027113 GO:0001228|GO:0006355|GO:0016602
Tsu03g01048 128 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 38 IPR003958 -
Tsu03g01048 128 Gene3D Histone, subunit A 1 81 IPR009072 GO:0046982
Tsu03g01048 128 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 1 86 - -
Tsu03g01048 128 PRINTS CCAAT-binding transcription factor subunit A signature 2 20 - -
Tsu03g01048 128 PRINTS CCAAT-binding transcription factor subunit A signature 21 39 - -
Tsu03g01048 128 PRINTS CCAAT-binding transcription factor subunit A signature 40 58 - -
Tsu03g01048 128 MobiDBLite consensus disorder prediction 110 128 - -
Tsu03g01048 128 SUPERFAMILY Histone-fold 3 64 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01048 2 71 CCAAT-HAP3 Transcription Factor Family AT2G38880 45.714 5.17e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01048 K08065 - smo:SELMODRAFT_450037 75.0997