Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01015 atgcCACAGGAGGGGTCCCAAAATTCATTTTTCACATCACCTTCAAAGAGAGGATTGAAGGGTCTAGTTTCTATGAATATCAAGGAAGCTTCATCCCCTAACATAGAAGAGAGTTTCAACGATTATGATTTTGCTCATAGGAAAGCAGAAGAAGCAGCTTCAAGGAGATACGAAGCATCAGAATGGTTACGTGAAATGGACAATATTGCATCTTCATTCTTACCACCAAAACCCTCACAACAACAATTCTGTCTAGAACTTCGCAACGGTCTAATTCTCTGCAATGTCCTCAACAAAGTGAATCCTGGTGCTGTTGTCAAAGTTGTGGATACTGCTACTGCTACTGTAGAAGGTGCAGCACATTCTGCTATTCAGTATTTTGAGAATATGAGAAACTTTCTTTATGCTGTTAAAGATATGCAACTCTTGACTTTTGAAGCTTCTGATTTGGAGAAGGGTGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAAGGATACTATGAATGGAAACTATCTGGTGGAGTTGGTGTGTGGAGGTATGGTGGAACTGTGAGGATTACTTCCTTACCAAAGAGTTCTCCTTCTTCCTCCATAGTTGGCAGTGAAAGTCTTGATGATTCACTTGACGAGTCTGAATCATCGCAGTATGAACATCTGCTACAATTTCTTCACCTATCTGAAGAGTTCTTGAATGAAGAAACCAAAACTACCAATGTTCTTGTTTTCCTTTTTGATTACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGACAGATGGGATTGATGATCTGCCTCTTAATACAATGGTAATTGATACCTTACTCAGCAAGGTAGTCAAGGATTTCTCGTCTTTGCTTGTTGCACAAGGCACTGAGCTTGGacttttcctgaagaaaatattaaaagggGATATTGGCTGTCTCTCAAAGAGGGAGTTTATAGAAGCTATATCACTATATCTTAATCAAAGAAGTAGTTTGGCATCAAATGATTTCTCCAAATTCTGCAGTTGTGGTGGCAAGCGTGATAGTGTTCGACAAAATGTCAATTACTCTGCCAAATatggtgaagtaatcaatacTCAACAGAAACAACTTGAGAGGATGAAATACTTCTTTGAAGATACAAAACAGGAAGTCAAACAAATTCAATCGGAGTGGGAACAAGAATTTAGTAGGCTAGAACATCATATTAAGAGCCTTGAAGTGGCCTCCACTTCTTACCACAAAGTTTTGGAAGAGAACCGTTTTCTTTACAACCAAGTACAAGACCTCAAAGGAGCAATTAAGGTCTACTGTAGAGTGAGACCCTTCTTACCGGGACAATCAAATGGACAGTCTACTGTAGATTATATTGGAGAAAATGGAGACATGATGATTGTGAATCCCCTCAAGCAAGGAAAAGATGCAAGAAGGGTATTTTCATTCAATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGCTGACACTCAACCGTTGATCAGATCTGTTTTAGATGGTTATAATGTATGTGTGTTTGCATATGGACAGACTGGTTCGGGAAAGACCTACACGATGAGCGGCCCTGATCTATTAGCTGAAGAGACATGGGGTGTAAACTATAGGGCTTTACGTGACTTATTTTATATAGCAAAGGAAAGAGCAGATTCCATAAAATATGAAGTTTTCGTCCAGATGATTGAAATTTACAATGAACAAGTGAGAGATTTATTGATCAGTGATGGCTCTAACAGAAGATTAGATATACGAAACACCTCCCAACTGAATGGCCTCAATGTTCCTGATGCATTTTTAGTTCCAGTTACTTGTACTCGAGATGTTCTACATTTAATGAGAATTGGTCAGAAAAACCGTGCTGTAGGTGCTACAGCTCTAAATGAGAGAAGCAGTCGTTCTCACAGTGTATTGACTGTTCATGTTCGAGGTAGGGAGTTAGTTTCTAACTCCATTCTTAGGGGTTGTCTCCATCTTGTGGATTTGGCTGGTAGTGAGAGAGTTGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCCCAACATATAAATAGATCACTTTCAGCACTTGGGGATGTTATTTCTGCTTTGGCACAGAAAAGTTCCCATATCCCTTACAGAAATAGCAAGCTCACACAAGTGTTACAAGATTCTTTAGGAGGGCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAACTTAATGCTATTGGGGAGACAATTAGCACACTCAAGTTTGCTGAGAGGGTTGCTTCCATTGAACTCGGGGCTGCTCAATCTAATAAAGAAACTGGTGAAATTCGAGAACTGAAGGAAGAGatatCAAGTCTCAAACTGACATTGGAGAGAAAAGAAACAGAACTGGAGCAGTGGAAAGCTGGGAATGCTCGAAACACTACAGAGTCTCCGAAACCAAGAGCTATTTCACCTTATCATTTGCCCAAATATGGCACCAGTGGAAACATGAAGCCTGAAACTAGTCAACGACTTATGGATGATAGAAACTTTGAGGCTAGAAGTTGTTCTTCGGGTAAGCAAAGAAGGTCAAGGTTTCCCTCAGCATTAATGGACAAGGAGTCCATACCGAAAATGTCCCTTCTCACTGAAGAGAAACTAGTGAGCTCACGGAAAGGAAGAACACCATCACCTCCAGTTAGAAGATCAACATCTACTGATAGAGGGTCGGTCATTAAAAGCAAGTCAAAAAATGACACAGCAGAGAATCAACCAGTATTAAAGCATCCATTTCCCGCTCGAGTACCTGTTAACAAATTCCTTGCCACAATGCCAATGGCTACATCTCTTGAGAATAATGCAAGGTTGCATGTGAATTCACCAGAGCCAGTAAAGCATGAAGAGGAACAATTCAAGCAAGCACTTAGTGCTGCAAGACAAGGCGGTGTTAGAAAAAGCAAGGTTGAAAGTAAGGCTAAGGCAAAGCATCATCAACTTTCTCCCTTTAAGCTTCACAACCCTGATTTGATCCCAACATTTATTTCTGGCATGGAGTTTGATGGTGAAAAGACTGTAGAGACACCTCCAAAGAGTGATCACTCTGATCCCGAAAATGATCTTAGACTTGTTGAGTCTGTTGTTCATGGTGCTTTAAATCTCACTAAGATACGTCAGAACTTTTCAAAGAATTTTCAGAACCTTGAATCAAGAAAAATAGTGCAAGGAGGAGAGCCTTTATCAGCTAGCAAAGTTGAAAACAAACTTTTGAACGGTTCAGGTAGCAATCATAAAGAAGGAAATAATACATCCATGCCTGAATTTAGAAGGAGCCGATCTACGCCACGCGGAAAGTTTTTGGGTTTATCATGA 3345 0.3943 MPQEGSQNSFFTSPSKRGLKGLVSMNIKEASSPNIEESFNDYDFAHRKAEEAASRRYEASEWLREMDNIASSFLPPKPSQQQFCLELRNGLILCNVLNKVNPGAVVKVVDTATATVEGAAHSAIQYFENMRNFLYAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSLPKSSPSSSIVGSESLDDSLDESESSQYEHLLQFLHLSEEFLNEETKTTNVLVFLFDYFGLRLLQAYLRETDGIDDLPLNTMVIDTLLSKVVKDFSSLLVAQGTELGLFLKKILKGDIGCLSKREFIEAISLYLNQRSSLASNDFSKFCSCGGKRDSVRQNVNYSAKYGEVINTQQKQLERMKYFFEDTKQEVKQIQSEWEQEFSRLEHHIKSLEVASTSYHKVLEENRFLYNQVQDLKGAIKVYCRVRPFLPGQSNGQSTVDYIGENGDMMIVNPLKQGKDARRVFSFNKVFGTSVTQEQIYADTQPLIRSVLDGYNVCVFAYGQTGSGKTYTMSGPDLLAEETWGVNYRALRDLFYIAKERADSIKYEVFVQMIEIYNEQVRDLLISDGSNRRLDIRNTSQLNGLNVPDAFLVPVTCTRDVLHLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSSHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVASIELGAAQSNKETGEIRELKEEISSLKLTLERKETELEQWKAGNARNTTESPKPRAISPYHLPKYGTSGNMKPETSQRLMDDRNFEARSCSSGKQRRSRFPSALMDKESIPKMSLLTEEKLVSSRKGRTPSPPVRRSTSTDRGSVIKSKSKNDTAENQPVLKHPFPARVPVNKFLATMPMATSLENNARLHVNSPEPVKHEEEQFKQALSAARQGGVRKSKVESKAKAKHHQLSPFKLHNPDLIPTFISGMEFDGEKTVETPPKSDHSDPENDLRLVESVVHGALNLTKIRQNFSKNFQNLESRKIVQGGEPLSASKVENKLLNGSGSNHKEGNNTSMPEFRRSRSTPRGKFLGLS 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01015 1114 MobiDBLite consensus disorder prediction 1078 1114 - -
Tsu03g01015 1114 MobiDBLite consensus disorder prediction 834 851 - -
Tsu03g01015 1114 ProSiteProfiles Kinesin motor domain profile. 432 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g01015 1114 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 21 1109 - -
Tsu03g01015 1114 Coils Coil 767 801 - -
Tsu03g01015 1114 SMART ch_5 55 169 IPR001715 GO:0005515
Tsu03g01015 1114 Pfam Kinesin motor domain 438 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g01015 1114 MobiDBLite consensus disorder prediction 797 920 - -
Tsu03g01015 1114 Pfam Calponin homology (CH) domain 56 171 IPR001715 GO:0005515
Tsu03g01015 1114 PRINTS Kinesin heavy chain signature 507 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g01015 1114 PRINTS Kinesin heavy chain signature 630 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g01015 1114 PRINTS Kinesin heavy chain signature 710 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g01015 1114 PRINTS Kinesin heavy chain signature 661 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g01015 1114 Gene3D - 44 171 IPR036872 -
Tsu03g01015 1114 SUPERFAMILY Calponin-homology domain, CH-domain 47 199 IPR036872 -
Tsu03g01015 1114 MobiDBLite consensus disorder prediction 888 915 - -
Tsu03g01015 1114 ProSiteProfiles Calponin homology (CH) domain profile. 53 171 IPR001715 GO:0005515
Tsu03g01015 1114 Gene3D Kinesin motor domain 374 762 IPR036961 -
Tsu03g01015 1114 SMART kinesin_4 430 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g01015 1114 MobiDBLite consensus disorder prediction 1078 1101 - -
Tsu03g01015 1114 PANTHER KINESIN-LIKE PROTEIN KLP-3 21 1109 - -
Tsu03g01015 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 797 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01015 Tsu-Chr3 9404292 9412878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01015 423 760 Calmodulin-binding Proteins AT5G65930 41.860 1.42e-73 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01015 K10406 - gmx:100786466 1822.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01015 03 9404292 9412878 Tsu05g04097 05 51698021 51704978 PCT