Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01010 ATGTTTCCAATAGAGACCACAAGATCATGGGAATTTCTTGGGCTAGAGAATAATAATCGACTGGTTCCTAAAGACTCTATATGGGGGAAGGCAAGATATGGTGATGGTACAATCATCGCTAACATTGATACAGGTGTTTGGCCTGAATCCAAAagttttagtgatgatggaatgGGTCCTGTCCCATCAAAGTGGCATGGGATCTGCCAACTTGACAATTTTCATTGCAATAGGAAATTGATAGGAGCAAGATTCTACAGCAAAGGTTATGAATCAAAATTTGGCAGGCTGAACCAGTCCTTTTACACTGCACGAGACATATTAGGCCATGGCACACCAACATTATCAATCGCCGGAGGCAACTTTGTTTCAGGAGCAAATGTTTTCGGCTTTGCCAACGGTACTGCAAAAGGTGGACCACCGAGATCACATGTTGCAGCATACAAGGTCTGCTGGCTTGGAACAATTGAAATTGAATGCACTGATGCAGATATCATAGAAGCATTTGAGGATGCAATAAGTGATGGTGTTGATATAATTTCATGTTCTCTTGGTAAAAATAGTCCGACAGAATTTTTCGAAGATGGAATTTCTATAGGGGCTTTTCATGCGATTGAAAACGGTGTAATGGTAGTTACTGGTGGAGGTAATTCAGGACCAAAATTTGGAACTGTGACTAATTTGGCACCTTGGTTGTTTAGTGTTGGTGCTAACACAATAGATAGAAGCTTTGTTAGTTATCTTCAACTTGGTGACGACAAGCACATAATAATGGGAACTAGTCTTTCTACAGGTTTGCCATATGAGAAGTTCTACTCTTTGATCAGTTCTGTTGATGCTAAAGCTGCTAATGCAACACTTGAAGATGCTCAAATCTGTGAGGTTGGAACTCTTGATCCTAACAAAGTGAAGGGAAAAATCTTGTTCTGTCTCCTAAGGGAGCTAAACGGATTAGTTTATGCGGAAGAGGAAGCTGTTTCTTGTGGAGCAATAGGACTTATTTTGGGAAATGATAAGCAACGTGGAAATGACATTATGGCATATCCTCATTTGTTGCCAACTTCACATATCAATTACACAGATGCTGAATATGTTTATTCCTACATTGAAGCCACCAAGACTCCAATGGCTTACATGAGTAGGGCAAAAACTGAAGTGGGAGTAAAACCAGCTCCAGTAATAGCTTCACTCTCATCAAGGGGACCTAATCCCATCCAACCAATAATCCTCAAGCCTGATATCAGTGCACCAGGTTTGGACATTCTTTATGCTTACATAGGAGCAATAAGTCCAACTGGTCTAGCATCAGATAATCGTCGGATTCCTTATATTATAGGGTCAGGAACTTCTGTGGCATGCCCTCATGTTTCTGGTATTGTTAGCCTTCTCAAAACACTTTATCCTCATTGGACTCCTGCTGCCTTTAAATCTGCAATCATGACTACAGCAAGAGTACTAGACAACAATGACACTCCAATTAAAGATCAATCTAAGGAAGATGCAACTCCATTTGGTTATGGAGCAGGACACATACAACCAGAACTTGCTATAGACCCTGGACTTGTCTATGATCTAAACATTGTCGATTACTTGAACTTCTTATGTTCTCATGGTTACAACAAAACACAGATGAAATTGTTTTCTAGGAATCCTACACTTGTCCTAAAAATTAGTCGGACAGTTACGAATGTTGGATCGCCGGGTACATATCATGTGCATGTTAAGGAACCTCATGGGATATCTGTTTTGGTTAAGCCAAGATCATTAACATTTGATGAAGTTGGTGAAAAGAAGACATTTAAGGTTATTTTTAAGGTAAGAAAATCAACATCATCGGCAGGTTATGTGTTTGGTCACTTGTTGTGGTCTGATGGTAGACACAAAGTTATGAGTCCTCTTGTAATCAGGCATAACTAG 1917 0.3959 MFPIETTRSWEFLGLENNNRLVPKDSIWGKARYGDGTIIANIDTGVWPESKSFSDDGMGPVPSKWHGICQLDNFHCNRKLIGARFYSKGYESKFGRLNQSFYTARDILGHGTPTLSIAGGNFVSGANVFGFANGTAKGGPPRSHVAAYKVCWLGTIEIECTDADIIEAFEDAISDGVDIISCSLGKNSPTEFFEDGISIGAFHAIENGVMVVTGGGNSGPKFGTVTNLAPWLFSVGANTIDRSFVSYLQLGDDKHIIMGTSLSTGLPYEKFYSLISSVDAKAANATLEDAQICEVGTLDPNKVKGKILFCLLRELNGLVYAEEEAVSCGAIGLILGNDKQRGNDIMAYPHLLPTSHINYTDAEYVYSYIEATKTPMAYMSRAKTEVGVKPAPVIASLSSRGPNPIQPIILKPDISAPGLDILYAYIGAISPTGLASDNRRIPYIIGSGTSVACPHVSGIVSLLKTLYPHWTPAAFKSAIMTTARVLDNNDTPIKDQSKEDATPFGYGAGHIQPELAIDPGLVYDLNIVDYLNFLCSHGYNKTQMKLFSRNPTLVLKISRTVTNVGSPGTYHVHVKEPHGISVLVKPRSLTFDEVGEKKTFKVIFKVRKSTSSAGYVFGHLLWSDGRHKVMSPLVIRHN 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01010 638 ProSitePatterns Serine proteases, subtilase family, serine active site. 448 458 IPR023828 -
Tsu03g01010 638 SUPERFAMILY Subtilisin-like 23 517 IPR036852 GO:0004252|GO:0006508
Tsu03g01010 638 Gene3D Peptidase S8/S53 domain 36 530 IPR036852 GO:0004252|GO:0006508
Tsu03g01010 638 Gene3D - 540 637 - -
Tsu03g01010 638 Pfam Subtilase family 34 509 IPR000209 GO:0006508|GO:0008236
Tsu03g01010 638 CDD PA_subtilisin_like 247 377 - -
Tsu03g01010 638 PRINTS Subtilisin serine protease family (S8) signature 106 119 IPR015500 -
Tsu03g01010 638 PRINTS Subtilisin serine protease family (S8) signature 34 53 IPR015500 -
Tsu03g01010 638 PRINTS Subtilisin serine protease family (S8) signature 447 463 IPR015500 -
Tsu03g01010 638 Gene3D - 241 386 - -
Tsu03g01010 638 ProSiteProfiles Serine proteases, subtilase domain profile. 9 517 - -
Tsu03g01010 638 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 553 IPR045051 -
Tsu03g01010 638 Pfam Fibronectin type-III domain 551 635 IPR041469 -
Tsu03g01010 638 CDD Peptidases_S8_3 6 483 IPR034197 -
Tsu03g01010 638 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 556 636 IPR045051 -
Tsu03g01010 638 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 556 636 - -
Tsu03g01010 638 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 4 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01010 Tsu-Chr3 9365927 9370873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01010 4 636 Subtilisin-like Serine Gene Family AT2G04160 53.030 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01010 - - qsu:112012946 764.607