Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu03g00968 | ATGGATGAAGATTTCGACATTCCGGCAGTTGATGAAATGAACGAAGATTTCGAATTCGCCGGAGCTGAAGGTAATCCAATTCTCAAGGTCGGTGAAGAGAATAAGATTGGTAAGCAAGGTTTGAATAAGAAGCTTCTTAAAGAAGGTGAAGGTTGGGATACTCCTGATGTTGGCAATGAAGTTTACGtTCACTATACTGGAATGTTGCTTGATGGTACTAAATTTGATTCTAGCATATATAGGGGAACACCTTTCAACTTTAAGCTTGGACAAGACTGCAGTACTGGCTTTGGATGA | 297 | 0.4007 | MDEDFDIPAVDEMNEDFEFAGAEGNPILKVGEENKIGKQGLNKKLLKEGEGWDTPDVGNEVYVHYTGMLLDGTKFDSSIYRGTPFNFKLGQDCSTGFG | 98 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu03g00968 | 98 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 54 | 91 | IPR001179 | GO:0003755 | |
| Tsu03g00968 | 98 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 91 | - | - | |
| Tsu03g00968 | 98 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 58 | 98 | IPR001179 | GO:0003755 | |
| Tsu03g00968 | 98 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 91 | - | - | |
| Tsu03g00968 | 98 | SUPERFAMILY | FKBP-like | 31 | 97 | - | - | |
| Tsu03g00968 | 98 | Gene3D | - | 32 | 97 | IPR046357 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu03g00968 | Tsu-Chr3 | 8943871 | 8945104 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tsu03g00968 | 40 | 93 | Calmodulin-binding Proteins | AT5G48570 | 42.593 | 8.00e-06 | 40.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu03g00968 | K09571 | - | gmx:100794411 | 145.206 |