Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00954 ATGttcttgatcttgtttttattgACAGATCATCCGATTATTCACAGAGACATAAAAGCATCGAATATCTTAATAACAGACAGGCTAAGAGCCAAAGTGGCAGACTTTGGTTTTGCTAGGTTGGCTCCAGATGATCCAAATGCAACTCATATTTCAACTCAAGTTAAAGGAACAGCTGGTTACTTGGATCCTGATTACATGAGAACACGCCAACTCACTGTAAAGAGCGATGTTTATTCATTTGGTGTGTTACTTGTTGAAATGATGACAGGAAGACATCCAGTTGAACCACAGAAACCACTCGATGAGAGAGTTACAATTAAATGGGCAATGCAGTTATTGAAACAAGGAGAAGCTGTGATTGCAATGGATCCAAGGCTTAGGAGAAATTCAACCTCAAACAAAGCTGTACAAAAGGTTCTCAAGCTTGCTTTCCAATGCCTTGCACCTGTCAGACGATTGCGGCCATCCATGAAGAATTGTCAAGAGGTTCTATGGGAAATTCGTAAAGAGTTTAGAGACAAAGTCTTTTCTCGTCCTCCACCTATTGGTCCTCACCATTCAGCAGATTTTCCTCAGAAAGATTCTAGGAAGAAAAGACATAAGACATTTGCAACACCACTACTTGAAATATCTTCACGAGAAAGACAAGGATTTGAAAAATGGGTTCCAAATTACCATGCTCAGTATAGTCCCCATTTTTCCCCTTTCAAATTTGAACTGGAACAAGCTTACTATGCAACTGCTGAGAGTGTTCGTGATCGTCTCGTTCAGCAATGGAATGAAACATACTTACATTTTCACAAAGTTGATCCCAAGCAAACATACTACTTATCAATGGAGTTCCTTCAAGGTCGAGCTTTGACAAATGCTATTGGAAATCTCAATATACAAGATGCATATGCTGATGCTTTACGCAAATTCGGGCTTGAACTTGAAGAAATAACAGAGCAGGAGAAGGATGCAGCACTAGGAAATGGTGGTCTTGGAAGGCTTGCTTCTTGCTTTCTGGATTCCATGGCAACACTTAATTTGCCTGCTTGGGGGTACGGTTTGAGGTATAGGTATGGACTATTTAAGCAGATAATCGCAAAAGACGGTCAGGATGAAGTTGCAGAAGACTGGCTTGAGAAATTTAGCCCCTGGGAAATTGTGAGGCATGACATTGTGTACCCGATTAGATTCTTTGGCCAGGTCGAGGTTAATCCTAATGGAAGCCGAAAATGGATTGGTGGAGAAGTTATGCAAGCACTAGCTTATGATGTGCCGATTCCTGGATACCAGACCAAGAACACCATCAGTCTTCGTCTCTGGGAAGCTAAAGCGCGTGctgatgattttgatttatttttattcaatgaTGGACAGCTTGAATCTGCTTCAGTGCTTCACTCACGAGCTCAACAGatTTGTTCGGTCTTGTATCCTGGAGATGCCACAGAAGGTGGAAAACTTTTACGGCTGAAGCAGCAGTACTTTCTCTGCAGTGCATCACTTCAAGACATTATTTCCCGATTCAAGGAGAGGAGGCAAGGACCTTGGAACTGGTCTGAGTTCCCGACAAAGGTTGCTGTACAACTGAATGATACTCACCCAACCCTTTCAATACCAGAGTTAATGCGATTACTTATGGATGAAGAAGGACTTGGATGGGATGAAGCATGGGAGGTGACATCAAAGACAATTGCTTACACTAATCACACTGTCCTCCCTGAAGCGCTGGAGAAATGGTCTCAACCTGTAATGTGGAAACTGCTTCCTCGCCACATGGAAATCATAGAAGAAATTGACAAAAGATTCACTACAATGATAACTAAAACCCGATTGGACCTTGAGAGTGAACTTTCCAACATCCGCATCTTGGACAATAATCCACAGAAGCCAGTTGTTCGGATGGCTAATTTGTGTGTGGTTTCTGCTCATACTGTGAACGGTGTTGCCCAGTTACACAGTGATATATTGAAGTCAGAATTATTTGCAAATTATGTTTCAATATGGCCAACAAAGTTCCAAAACAAAACTAATGGCATTACACCTCGAAGATGGCTAAGTTTTTGCAGTCCTGAGCTAAGCCAAATAATCACTAAGTGGTTAAAAACTGATAAGTGGGTAACCAATCTCGACTTATTAACAGGTCTTCGAGAGTTTGCTGACAATGAAGATCTACAAGCAGAATGGCTGTCTGCAAAGAAGGCTAATAAGCAGCGCTTGGCACAGTACGTTCTGAAGGTGACAGGGGAGAGCATTGACCCTGATACTCTATTTGACATTCAGGTCAAGCGTATCCATGAATACAAGAGGCAGCTACTAAATATTCTTTATGTGATCTATAGATATAAAAAGTTGAAGGAGTTGAGCCCTGAAGAACGGAAAAGTACAACTCCACGCACTGTCATGATTGGAGGAAAGGCATTTGCAACATACACAAATGCTAAACGGATAGTCAAGCTGGTCAATGATGTTGGTGCTGTTGTAAACAGTGACCCTGAGGTCAATAGCTACTTGAAGgttgtttttgTTCCAAATTACAACGTATCAGTGGCTGAGGTGCTTATCCCTGGGAGTGAGCTATCGCAGCATATTAGTACCGCAGGCATGGAAGCAAGTGGCACTAGCAACATGAAATTTGCTTTGAATGGGTGCCTTATTATAGGTACGTTAGATGGAGCTAATGTGGAAATCAGGGAAGAGATTGGTGAGGAGAATTTTTTCCTCTTCGGTGCCACAGCGGATGATGTCCCTCGACTGAGGAAGGAAAGAGAGGATGGATTGGTATGTACttacattcattaa 2793 0.4132 MFLILFLLTDHPIIHRDIKASNILITDRLRAKVADFGFARLAPDDPNATHISTQVKGTAGYLDPDYMRTRQLTVKSDVYSFGVLLVEMMTGRHPVEPQKPLDERVTIKWAMQLLKQGEAVIAMDPRLRRNSTSNKAVQKVLKLAFQCLAPVRRLRPSMKNCQEVLWEIRKEFRDKVFSRPPPIGPHHSADFPQKDSRKKRHKTFATPLLEISSRERQGFEKWVPNYHAQYSPHFSPFKFELEQAYYATAESVRDRLVQQWNETYLHFHKVDPKQTYYLSMEFLQGRALTNAIGNLNIQDAYADALRKFGLELEEITEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQIIAKDGQDEVAEDWLEKFSPWEIVRHDIVYPIRFFGQVEVNPNGSRKWIGGEVMQALAYDVPIPGYQTKNTISLRLWEAKARADDFDLFLFNDGQLESASVLHSRAQQICSVLYPGDATEGGKLLRLKQQYFLCSASLQDIISRFKERRQGPWNWSEFPTKVAVQLNDTHPTLSIPELMRLLMDEEGLGWDEAWEVTSKTIAYTNHTVLPEALEKWSQPVMWKLLPRHMEIIEEIDKRFTTMITKTRLDLESELSNIRILDNNPQKPVVRMANLCVVSAHTVNGVAQLHSDILKSELFANYVSIWPTKFQNKTNGITPRRWLSFCSPELSQIITKWLKTDKWVTNLDLLTGLREFADNEDLQAEWLSAKKANKQRLAQYVLKVTGESIDPDTLFDIQVKRIHEYKRQLLNILYVIYRYKKLKELSPEERKSTTPRTVMIGGKAFATYTNAKRIVKLVNDVGAVVNSDPEVNSYLKVVFVPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEENFFLFGATADDVPRLRKEREDGLVCTYIH 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00954 930 ProSiteProfiles Protein kinase domain profile. 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00954 930 Gene3D Glycogen Phosphorylase B; 680 929 - -
Tsu03g00954 930 SUPERFAMILY Protein kinase-like (PK-like) 5 178 IPR011009 -
Tsu03g00954 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 13 25 IPR008271 GO:0004672|GO:0006468
Tsu03g00954 930 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 226 920 IPR011833 GO:0004645|GO:0005975|GO:0030170
Tsu03g00954 930 Gene3D Glycogen Phosphorylase B; 211 679 - -
Tsu03g00954 930 Pfam Carbohydrate phosphorylase 305 920 IPR000811 GO:0005975|GO:0008184
Tsu03g00954 930 SMART serkin_6 3 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00954 930 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 226 922 - -
Tsu03g00954 930 PANTHER GLYCOGEN PHOSPHORYLASE 225 925 IPR000811 GO:0005975|GO:0008184
Tsu03g00954 930 Pfam Protein kinase domain 10 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00954 930 Gene3D Transferase(Phosphotransferase) domain 1 4 179 - -
Tsu03g00954 930 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 867 879 IPR035090 -
Tsu03g00954 930 PANTHER ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC 225 925 - -
Tsu03g00954 930 MobiDBLite consensus disorder prediction 179 198 - -
Tsu03g00954 930 CDD GT35_Glycogen_Phosphorylase 227 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00954 Tsu-Chr3 8827949 8838134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00954 226 924 Glycosyltransferase AT3G46970 84.308 0.0 1255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Tsu03g00954 Phosphorylase 9.2e-269 CL0113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00954 K00688 - gmx:100789789 1315.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00954 03 8827949 8838134 Tsu03g00954 03 8827949 8838134 ECH