Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00947 ATGGCAATCTCAGCTGCTGCTGCCGTTGTAGGTAAAGTGTTAGATTATCTGAGCGAACCGGCAAAAACATTAGCTAAACAATGCCTGTGTGCTAATAAAGTCAGCAAGCAGCttgataaagaaaagaaagagctGATGTCTGAGCTAGATGATCTGTTGAACATGGTTGAACAAGCTAAACAAAGAGctgaagaaattgaaaaatcagTGAATAAATGGATAAATAATGTGGAAAATCTGCTCAAGGAGGTGACAGATCTGGAGCGAAGGATGACAGCAACAACTAGTTGCTTGAATGGAAAATGTCCAACATTGGAAAGATACCGCTTATGCAAGGAAATGATGAAAAAGATAAAAGCTTTAACAGAGTTCAAAGGAAAAAGCAATTTCAAACCACTTTCCCACCCTGCTCCTCTTCCAGGCATTCTATACCGCCAGGTGTCCCAAACCTTCACTTATTTTGGGGCAACAAAAGCAGCTATCGATCAGATAATGGATGCCCTTCAAGATGATGACACCTACACGATAGGAGTCCATGGAATGGGTGGATCGGGGAAAACTACAGCTGCTATTGAAGTGGGAAGGGAAGCCAAAACACTAGGGTTATTTGATAATTTGATAGTAATCCCCATTTCACAAAACCCAAATATAAGTAACATCCAAGGATATATGGCAGACCTATTAGGagtgaaattggatgaagaaagtgaagagggAAGAGCGCAACGACTGTGGCTCACcttgaaacaaaagaaaaaagttcttTTGATAATAGATGACCTGTGGAAGAAAAGATTTAATTTGCAAGATATAGGGATTATCTTGGGTGATCACGGGGATGGTAAAGTGAAGATCATCATAACCACCCGTGATGAGTCTGTTTGCACTTCAATGGATTGTTCCAAAACGATCAAGTTGGATCTTTTATCTATTGATGAATCTTGGGATCTCTTTAAACTATGTGCTGGCATAGATGACAAATTCTCAAGATTATTAGATAATGTGCCTAGTAGAATTTGTTGGGAATGTAGAGGACTTCCCATAGCTATTAAAGCAGTGGGATCTTCCTTAAAAGGAAGACCTAATGTTGAATGGAGGGATGCCTTACAGAAGTTAAAAAACCCAAATAACATCAAGGACCATGTGGAGGGAGTGGGAGATGTTTTGAACTGCTTGAAGTTGAGTTATGATATCTTACCGTGCAAAAGAGAAAAAGAGCTCTTCTTGTTGTGTTGTATGTTTGGTGCAAGTCATTtccaaattgaaattttgattagATATTCAGTGGGGCTTCTTAACTTTGGAGAAAATGATTCATTAGACTCTGCAAGGAACGAAGTTGAAGCATGCATAACTAGATTTTTAGGTTCTGGTTTGTTGACTTGTTACGAGGAAATAATTGTTGGGGATACACCAGAGTATTTGCAGGTTCACGATATGTTTCGGAATACTGGCCGGTGGATAGCAAAACATTTCGAGaagaattataatttttttaatgttgccAAAACACTCACCACCCCAATAGAGAAAGATATTCTGGAGGATTGTTTTGGGGTAACCTCATGGTACAATGATGGTGTGGAGaaagttgattttcttttccatttcGATGCTCCAAACCTTCAAATTATAGCTCTATGTGGTAACTTCAAATCATCACCACTTTTATCATTTGAAGGAATAAAAGGACTCAAGGTTTTTGACCTTTCTCAGTTTTTGAATCAGAACATAGTGTTAACATTGCCCCTGTCAATCAAGTTTTTGGAAGATCTTCGATTCTTGCGCTTATGTAATTGGGAACTAGGCGACATTTCTTGCATATCAAGCTTAACCAGGCTTGAGTTACTTGCCTTGAACTCATCTACAATCAATGAGCTTCCTAATGATCTAGACAAACTCAAAAGATTGAAGTTACTTGATTTGAGCTACTGTAGATATCgtgaaaaaaattacaatggAGCAATAGGGAAATGTTCACAACTGGAAGAGCTTTATCTCAATACTCTAGGAAGTAAACCAAAAGAGTTCTATTGTCAGATTGTTGCAGATATTATTACTCTCCCAAAGTTGCAGAGGTTTGTCATAAAGTATAAGAGTGTGCAGTTCACGGTTTCTGTTGATGCTGtttcaaagaagaaaatattagAACTGGTGGATTTTGATATCTCGAAGTTGAGGGTGTCTAAAAAGAATCTTCTTCAACAAGCTGAAATTGTTGTCTTGGAGCGTGTTCATGGAGGATGTCCAAGTATTTTTCCAGACATGGTTGGAGTTGTGGGAGCCATGAACAGATTATCTCATCTCCATTTTGGAAAATGCCAAGAGATAGAATGTTTATTGGATACAACCTCTGGTTTTGAGGTAGACTTGCCGAATCTGGTGGAGTTAGTGTTATATGAATTGGCCAATTTGAAAGATTTGTGTCGAGGCCCGTCTATAAAAGTGCTACGCTTCTTGGAAAACTTGGAAACAGTTACCATAGTCGGTTGTTGCCAATTGAGCACCTTATTTCCTAGGGAAAGTAAGTTGAAAAATCTTACACATCTCACATTAATTGATTTCACTGGTGAAACACTATTCTCAATGTCTGTTGCTCAAAGCCTGCAACAATTGACTGAGCTGCATGTTCATAAATGTGTTGAATTGAAGCATATATTTGCTAGTGAAGGAGAGGGTGGTTCCAACGAAATCGTTCCGATTTCCCCTCAAAGGAGCTCACAATCTACTTTGATGCCTAAACTCAAGTCATTTGACCTTTCTAAATGCGTAAAGTTAGAGTCTGCATTCCCAAATTGTTGTGTTGAAGGATTTGCAGCATTAGAATCGATAATTATATCCGAGGCTCCCCAGTTGAAACTGATATTTGGTGAATTGGATCATCAAAATCATTCATCTCACCAATGCCAGAGCATCCATTCTCATTTGAAACATCTTGAACTCAACAATCTTGATAATCTCATCGGGATATGTCTTGAAGGTAATGGTGCAAGGTGGCCATCTTTGTCAGAGCCACTTGTCAATAACTGTCCAAAATTGACCGTTTACGAGGAGAaaaatGTGGAAAACGTTAAAGCATTGCTTGAGTTTGAGACAAGTGTGCCTCTTCAGCAACAACAGATTCTGTTCAATGGGAATGAAGTGAGCAATTCTCAGAAATTGGTGCTAACGATGACCGTCTCTTCTGGAGCTGGTGCTGCTGCTTCTAGTGAATTTACCAAATATGTGAGCTTCAATGCTGATGGATCTGTTGCAAACCCTTCTGATTTTCTGGAGGTCTTTAGACTTGATTCTAATTTGATGGGCCAGCTCTTTAGGAATGACCTGGAGTTGGCACGAGTTATTCTGGGGTATGATCTCGATAAACTCCAGGAAATTTTAAGATTGCGTCATCGCCAAAGAGATCAATTACGGCGTCAGAAAGAAGAGATGGCTCTTCTTTATGCTGATCCTTTTGATGTTGAAGCACAAAATAAGATTGAAGCTGCGATCCGCCAGAAAggaattgatgaaaattgggaAGCTGCACTCGAGCATAATCCTGAAGCTTTTGCAAGAGTGGTCAAGTTGTATGTTGACATGGAGGTTAACGGCGTACCAATGAAGGCATTTGTTGATAGTGGAGCACAATCTGCCATTATATCAAAAAGCTGCGCTGAGCGTTTAGGATTGCTGAGACTTTTAGATCAGCCTTACAAAGGAGTTGCTCACGGAGTTGGCCAAACTGAAATATTGGGTCAAAGACATGTAGCTCCAATCAAGATTGGGAATATATTTTACCCTTGTTCATTCTTAGTGCTGGATTCTGCCAACATGGAGTTTCTCTTTGGGCTGGATATGCTTCGAAAGCATCAGTGTATAAttgatttaaaagaaaatgttttgCGAGTTGGCGGAGGAGAAGTTTCTGTGCCGTTTTTGCAAGAGAAAGACATACCATCTCGGTATTTAGATGACGAAAAATATTCCAAGGAAGCTTCTAGCTCAGTAAGTCCACGTCCAGCTGCATCAGGAAGCAATAGTCTGTCACAAGCAGGCGCGTCTTCTGGAGGAGCTTCTGGTGACAAGTCTAAGGATTCTGTGTTTGAAAGCAAAGTTGCAAAGCTTGTTGAGTTAGGATTTGATAGACAAGCAGTTATACAAGCTCTTCAATTATTCAATGGCAATGACGAACAAGCAGTTGGCTTTCTTTTTGGATGA 4200 0.3788 MAISAAAAVVGKVLDYLSEPAKTLAKQCLCANKVSKQLDKEKKELMSELDDLLNMVEQAKQRAEEIEKSVNKWINNVENLLKEVTDLERRMTATTSCLNGKCPTLERYRLCKEMMKKIKALTEFKGKSNFKPLSHPAPLPGILYRQVSQTFTYFGATKAAIDQIMDALQDDDTYTIGVHGMGGSGKTTAAIEVGREAKTLGLFDNLIVIPISQNPNISNIQGYMADLLGVKLDEESEEGRAQRLWLTLKQKKKVLLIIDDLWKKRFNLQDIGIILGDHGDGKVKIIITTRDESVCTSMDCSKTIKLDLLSIDESWDLFKLCAGIDDKFSRLLDNVPSRICWECRGLPIAIKAVGSSLKGRPNVEWRDALQKLKNPNNIKDHVEGVGDVLNCLKLSYDILPCKREKELFLLCCMFGASHFQIEILIRYSVGLLNFGENDSLDSARNEVEACITRFLGSGLLTCYEEIIVGDTPEYLQVHDMFRNTGRWIAKHFEKNYNFFNVAKTLTTPIEKDILEDCFGVTSWYNDGVEKVDFLFHFDAPNLQIIALCGNFKSSPLLSFEGIKGLKVFDLSQFLNQNIVLTLPLSIKFLEDLRFLRLCNWELGDISCISSLTRLELLALNSSTINELPNDLDKLKRLKLLDLSYCRYREKNYNGAIGKCSQLEELYLNTLGSKPKEFYCQIVADIITLPKLQRFVIKYKSVQFTVSVDAVSKKKILELVDFDISKLRVSKKNLLQQAEIVVLERVHGGCPSIFPDMVGVVGAMNRLSHLHFGKCQEIECLLDTTSGFEVDLPNLVELVLYELANLKDLCRGPSIKVLRFLENLETVTIVGCCQLSTLFPRESKLKNLTHLTLIDFTGETLFSMSVAQSLQQLTELHVHKCVELKHIFASEGEGGSNEIVPISPQRSSQSTLMPKLKSFDLSKCVKLESAFPNCCVEGFAALESIIISEAPQLKLIFGELDHQNHSSHQCQSIHSHLKHLELNNLDNLIGICLEGNGARWPSLSEPLVNNCPKLTVYEEKNVENVKALLEFETSVPLQQQQILFNGNEVSNSQKLVLTMTVSSGAGAAASSEFTKYVSFNADGSVANPSDFLEVFRLDSNLMGQLFRNDLELARVILGYDLDKLQEILRLRHRQRDQLRRQKEEMALLYADPFDVEAQNKIEAAIRQKGIDENWEAALEHNPEAFARVVKLYVDMEVNGVPMKAFVDSGAQSAIISKSCAERLGLLRLLDQPYKGVAHGVGQTEILGQRHVAPIKIGNIFYPCSFLVLDSANMEFLFGLDMLRKHQCIIDLKENVLRVGGGEVSVPFLQEKDIPSRYLDDEKYSKEASSSVSPRPAASGSNSLSQAGASSGGASGDKSKDSVFESKVAKLVELGFDRQAVIQALQLFNGNDEQAVGFLFG 1399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00947 1399 Gene3D Ribonuclease Inhibitor 531 740 IPR032675 -
Tsu03g00947 1399 Gene3D Ribonuclease Inhibitor 751 955 IPR032675 -
Tsu03g00947 1399 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1360 1399 IPR015940 -
Tsu03g00947 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 411 IPR027417 -
Tsu03g00947 1399 Coils Coil 1120 1143 - -
Tsu03g00947 1399 MobiDBLite consensus disorder prediction 1327 1355 - -
Tsu03g00947 1399 Pfam UBA/TS-N domain 1363 1397 IPR015940 -
Tsu03g00947 1399 SUPERFAMILY Acid proteases 1174 1290 IPR021109 -
Tsu03g00947 1399 MobiDBLite consensus disorder prediction 1326 1358 - -
Tsu03g00947 1399 Pfam Aspartyl protease 1167 1289 IPR019103 GO:0004190|GO:0006508
Tsu03g00947 1399 Gene3D - 1006 1063 - -
Tsu03g00947 1399 PRINTS Disease resistance protein signature 248 262 - -
Tsu03g00947 1399 PRINTS Disease resistance protein signature 632 648 - -
Tsu03g00947 1399 PRINTS Disease resistance protein signature 343 357 - -
Tsu03g00947 1399 PRINTS Disease resistance protein signature 175 190 - -
Tsu03g00947 1399 PANTHER AT13091P 1010 1398 - -
Tsu03g00947 1399 PANTHER ASPARTYL PROTEASE DDI-RELATED 1010 1398 - -
Tsu03g00947 1399 Gene3D - 141 307 IPR027417 -
Tsu03g00947 1399 Gene3D Acid Proteases 1168 1314 IPR021109 -
Tsu03g00947 1399 Gene3D - 1327 1399 - -
Tsu03g00947 1399 CDD RP_DDI 1174 1297 IPR019103 GO:0004190|GO:0006508
Tsu03g00947 1399 SUPERFAMILY UBA-like 1357 1399 IPR009060 GO:0005515
Tsu03g00947 1399 Pfam NB-ARC domain 159 397 IPR002182 GO:0043531
Tsu03g00947 1399 Gene3D - 309 399 IPR042197 -
Tsu03g00947 1399 SMART uba_6 1362 1399 IPR015940 -
Tsu03g00947 1399 SUPERFAMILY L domain-like 476 1014 - -
Tsu03g00947 1399 Coils Coil 35 90 - -
Tsu03g00947 1399 CDD UBA_scDdi1_like 1363 1398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00947 Tsu-Chr3 8766043 8780851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00947 172 488 WRKY Transcription Factor Family AT5G45050 28.308 1.64e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00947 K11885 - cam:101506740 878.626