Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00916 ATGATATCTTTTGTTAAGAACAAGATCATGGAAATGGATACAAAtacatttccattttttatCATCCTAGCAGCTACACTCTCCGCATACTTATTTTGGTTCCACTTACTCACTCGAACCTTAACCGGTCCAAAAGTTTTCCCATTTTTCGGCAGCCTTCCGGTTCTTTTCATGAACCGAAATCGGGTTCACGATTGGATGACCTCAAACCTAAACCAAACTGGCGGTTCATCGACTTACCAAACATGTATCCTCCCATTCCCTTTCTTAGCTCGTAAACAAGGCTTCTACACTGTCACAAGCCACCCGAAAAACATCGAACACATACTCCGAACCCGGTTCGATAATTACCCAAAAGGACCCACGTGGCAAACCGCTTTCCATGATCTTTTAGGACACGGAATATTCAATAGTGATGGTGACACGTGGCTGGTTCAACGTAAAACCGCTGCACTTGAATTCACAACTCGAACCCTTCGTCAAGCCATGGCTCGTTGGGTGAACCGAACTATAAAAAACCGGTTATGGTGTATTTTAGATAAAGCCGCTAAAGAAAAAATAACCGTTGATTTACAAGATCTTCTTTTACGATTAACTTTTGATAACATTTGTGGACTTACTTTCGGTAAAGACCCGGAAACTCTCTCTCCGGATCTACCCGATAACCcgttttctctttcttttgatAATGCAACTGAAGCTACATTGCAAAGACTACTTTACCCCGGATTTATTTGGAGATTCCAGAAGCTTCTAGACTTCGGTGCTGAAAAGAAACTAAAACAGAGTTTGAAAATCGTTGAAACTTACATGAACGACGCCGTTTCAGCTCGCGAGAAATCGCCCTCCGATGATCTTTTATCGCGGTTTTTGAAAAAGCGTGACGGAGATGGAAAACCGTTTGACGCCGGAAAACTGATGCACATCGCGTTGAATTTTGTTCTCGCCGGAAGAGATACTTCATCAGTGGCATTGAGTTGGTTTTTCTGGCTTGTGATGAATCATCCGATCGTCGAGGAGAAGATTTTGACGGAGTTAACAGAGGTTTTAGCCGCGTCACGCGGCGGAGATTGTAATCGGTGGACGGAGGAAGCGATTGATTTCGAGGAAGCGGAGAAGCTAGTCTATCTAAAAGCAGCATTGGCGGAGACATTACGATTGTATCCATCTGTGCCGGAGGATTTTAAATATGCGGTTGACGATGATGTGTTACCGGACGGTACGGTGGTTCCGGCGGGTTCAACGGTGACATATTCGATATATTCAGTTGGGAGAATGAAAAGTGTTTGGGGTGAAGATTGTATGGAATTTAAACCGGAAAGATGGTTATCGGTTCAAGGAAACCGGTTCGAACCACCAAAAGATGGTTATAAGTTTGTGGCTTTTAATGCTGGACCGAGAACTTGTTTAGGGAAAGATTTGGCTTATCTTCAAATGAAATCTGTTGCTGCTGCTGTTTTGATTCGTTACCGGCTTTTACCAGTTCCTGGTCATAAAGTTCAGCAGAAAATGTCTCTAACACTTTTCATGAAGTATGGGTTACGTGTTTTCTTGTATCCACGTCAGCTACAGAAAGTTGAATCTGCTGTGTCTCATTGA 1599 0.4234 MISFVKNKIMEMDTNTFPFFIILAATLSAYLFWFHLLTRTLTGPKVFPFFGSLPVLFMNRNRVHDWMTSNLNQTGGSSTYQTCILPFPFLARKQGFYTVTSHPKNIEHILRTRFDNYPKGPTWQTAFHDLLGHGIFNSDGDTWLVQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKEKITVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPDNPFSLSFDNATEATLQRLLYPGFIWRFQKLLDFGAEKKLKQSLKIVETYMNDAVSAREKSPSDDLLSRFLKKRDGDGKPFDAGKLMHIALNFVLAGRDTSSVALSWFFWLVMNHPIVEEKILTELTEVLAASRGGDCNRWTEEAIDFEEAEKLVYLKAALAETLRLYPSVPEDFKYAVDDDVLPDGTVVPAGSTVTYSIYSVGRMKSVWGEDCMEFKPERWLSVQGNRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLIRYRLLPVPGHKVQQKMSLTLFMKYGLRVFLYPRQLQKVESAVSH 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00916 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Tsu03g00916 532 Gene3D Cytochrome P450 37 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 15 523 - -
Tsu03g00916 532 Pfam Cytochrome P450 97 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00916 532 PANTHER CYTOCHROME P450 15 523 - -
Tsu03g00916 532 SUPERFAMILY Cytochrome P450 34 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00916 Tsu-Chr3 8504832 8506515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00916 24 521 Cytochrome P450 AT5G58860 74.900 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00916 K15401 - gmx:100787559 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00916 03 8504832 8506515 Tsu03g00916 03 8504832 8506515 ECH