Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00887 ATGAAACTCTCAACTCCAACACAAACACCAACTTCTTCAAATGTATCTCCATCAATTTCATCCAACACACCAATGTGTACCTCAAAAACCACCACCACAGGGTGTCTCACAGCCATCATGCGCAAGATTCTTTGCTCAGGAAACCTTCCAAAAGattcatcaaatcaaataacaGAATTTGATTCAACAAACTCTGTTCTGAGTTGCAATGATATGGCttctgctgctgctgctgctgttaCTCCTCCTCCTCCTATAGTTGCAAGGTTGATGGGTTTAGAATCAATGGGAGAGATACCATTTACATCAAAACCAGGTTCACTTTCGCGAAGCAAATCGATGAACTCTATGGATTATTTGGGAGAAAGTAATGGAAAaattcagagtcttcatcataAGAGAATTAattcaacattgtcatttaGAGAGCCTCCAACTTTTCAGTTAACTGAAAATGAGAGTTTTTTTGTACTTAACTTTGAAAATGAAGTTGAGAGTATTAAAGGGttgaaatccaaatccatatccaatGGGAGAAAAAAGCAAATGGGCTGTTCTGAATTGAAGCagaaagatgaaaaaaagaTAGTTGAtttgaaagagaagaagaacaagagagaaaaTGTTTATGATGAGAAGATTTTGATTGAGAAAGGGAAAATGAACAAAAGGGTGTCTAATAAACTTCAAGAAATCACCAATACTTCATATAAGTTCAAGAGTTTATCCGAAAAGAAGTGTTTTGATTCAGAAGCAGTTGAATTGTTGAAGCTAAATAGCTACAAGGAAGATGTgattggtgaaaagaagaagaggagaataCGGAGGAAGAAAAGAACAAATTTTTATGCAGAAAAGAAGATTGAAACTGAATGCAAATCAGATGATTCAAGTCCTGTTTCTGTCCTCGAATTCGAGCGAAAGTCATGTGGAGCAGGAATAGATTCTATTGCAGTTGGTTTAAGTTCAAGAAGAAAGTTGACACCAGAACTTGAAAATAACAAGCACATTCTTATGCGTTCCGATGATAATTTAATGATTGATGAGAAGAAGGATAAGGCAAATGAAGGATCAAAGAAGAAAGAGATGCACAATTACAAAGAGTATATAGATATTTGGGGTGAAGCATGCAAGCTAGTTGAAGATGAATTGGTAATTGGATCAAAAAATCAAGTTCATGCATGGATGAATCAACAAAGTGGTTTAGGAAGTGTATGTGCTGATTTTGAATCAGAAATTTTTGATCAATTGTTGAATGAGGTGATAAGTCAACTTGTTGAGTAA 1284 0.31 MKLSTPTQTPTSSNVSPSISSNTPMCTSKTTTTGCLTAIMRKILCSGNLPKDSSNQITEFDSTNSVLSCNDMASAAAAAVTPPPPIVARLMGLESMGEIPFTSKPGSLSRSKSMNSMDYLGESNGKIQSLHHKRINSTLSFREPPTFQLTENESFFVLNFENEVESIKGLKSKSISNGRKKQMGCSELKQKDEKKIVDLKEKKNKRENVYDEKILIEKGKMNKRVSNKLQEITNTSYKFKSLSEKKCFDSEAVELLKLNSYKEDVIGEKKKRRIRRKKRTNFYAEKKIETECKSDDSSPVSVLEFERKSCGAGIDSIAVGLSSRRKLTPELENNKHILMRSDDNLMIDEKKDKANEGSKKKEMHNYKEYIDIWGEACKLVEDELVIGSKNQVHAWMNQQSGLGSVCADFESEIFDQLLNEVISQLVE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00887 427 PANTHER OS05G0128300 PROTEIN 27 427 - -
Tsu03g00887 427 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00887 Tsu-Chr3 8183712 8185103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00887 28 163 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 35.294 8.44e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00887 - - mtr:MTR_3g464300 568.54