Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00878 ATgggatttaaaattaatatcaaacaatttgttttttcaatcttcatctTCCTCGTAATCCCAACCCTAATAGCCGCAGAATGTACGTGCGATGAAGAAGATCaagatagaaacaaaacaaaagccCTACGTTACAAAATAGTGGCTTTAGTATCCATACTAGTTGCAAGTGCAATTGGTGTTTGcattccacttcttggaaaagTTATACCGGCTTTAAGCCCcgaaaaagatatattttttatcatcaaagcTTTTGCTGCCGGTGTGATATTGTCTACCGGTTTCATTCATGTTCTTCCCGATGCTTTTGAGAATCTCACTTCACCTTGTTTAAAGGAACATCCTTGGGGTGATTTTCCGTTCACCGGTTTTGTGGCTATGTGCACCGCTATGGGGACTCTTATGGTTGATACTTATGCAACTGCTTATTTTCAAAACCATTATACTAAAAAAGCACCAACACAAGTTGAGAGTCATGATCATGAGGCAACCTCAGATGTGGAGAAGGAAGCAGCAGATCATGAAGGACATGTGCATGTTCATACTCATGCATCACATGGTCATTCACATGGCCCTGTTTCTTCCCATCCATCATCGGAACTTCTTCGTCATAGAGTTATATCACAGGTATTAGAGTTGGGAATTATTGTTCACTCAGTTATAATAGGAATTTCTGTGGGTGCTTCAGAGAGTCCTAAAACTATAAGACCACTTGTAGCTGCGTTGACTTTTCATCAGTTTTTTGAGGGCATGGGACTTGGAAGTTGTATAACtcagGCAAATTTCAAGAGTCTATCAATTACAGTGATGGGATTGTTCTTTGCTTTGACAACTCCAGTAGGGATTGGAATTGGTTTAGGGATCAGTGGTGTTTATGATGAGAACAGTCCAACTGCCCTTATTGTTGAAGGAGTCTTCAATGCAGCTTCTGCTGGGATCTTAATCTATATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAGAGTGGTAGGTTGAGATTAGGGTGCAATCTATCTCTTCTACTAGGAGCTGGTTGTATGTCTCTTTTGGCCAAATGGGCTTAG 1086 0.3674 MGFKINIKQFVFSIFIFLVIPTLIAAECTCDEEDQDRNKTKALRYKIVALVSILVASAIGVCIPLLGKVIPALSPEKDIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLKEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFQNHYTKKAPTQVESHDHEATSDVEKEAADHEGHVHVHTHASHGHSHGPVSSHPSSELLRHRVISQVLELGIIVHSVIIGISVGASESPKTIRPLVAALTFHQFFEGMGLGSCITQANFKSLSITVMGLFFALTTPVGIGIGLGISGVYDENSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSGRLRLGCNLSLLLGAGCMSLLAKWA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00878 361 TIGRFAM zip: ZIP zinc/iron transport family 28 361 IPR004698 GO:0005385|GO:0016021|GO:0071577
Tsu03g00878 361 Pfam ZIP Zinc transporter 44 358 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tsu03g00878 361 PANTHER ZINC/IRON TRANSPORTER 16 361 - -
Tsu03g00878 361 PANTHER ZINC TRANSPORTER 1 16 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00878 Tsu-Chr3 8072929 8075249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00878 25 361 Inorganic Solute Cotransporters AT3G12750 56.598 6.42e-133 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00878 K14709 - gmx:547695 527.709