Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00875 ATGTCTTGTTCCGTTGCAGTTTCAAATTCTAATGTCTTCTCTCTGTCTTCTCCATGTCATTTCTCTCTCCCTTCACCGGTTTTGAAGAGACATAGGCCTGCTAAGCTTCATATACCAGTTGCTTCTCTAACTGTTGAAGTCCTTCCGCCGGTACCGTCTCCGACACCGGCAAAGGATGTTGTTGAGGTGGAGGGAATTGGGTTTTCTGTGTATTGTAAGAAAGGAATTAGAAAACAAATGGAAGATCGTTACTCTGCTTCTGTTAATCTTCATGGAGAATCAAAACaggCTTTTTTTGGCGTATTTGATGGGCATGGAGGTACAAAAGCATCAGAATTTGCAGCACATAACTTGGAAAAGAATGTGTTAGAAGTGATTAAAAGTGATTATGAGAGTGATATTGAGGAAGCTGTGAGAAATGGCTACCTTAAAACAGATTCAGATTTCTTAAAAGAGGAACTTAATGGTGGCTCTTGCTGTGTAACAACATTGATTAGGAATGGTAATCTTATTGTGTCTAATGCCGGCGATTGTCGTGCTGTTATCAGTAGAGGAGGTGTTGCTGAGGCATTAACATCTGATCATAAACCTTCAAGGATAGATGAAAAGGAAAGGATTGAAACTCAGggCGGTTATGTTGATATGTGTCGCGGTGTTTGGAGAATCCAAGGATCTCTTGCTGTTTCAAGGAGCATTGGAGATAGACACATGAAACAATATGTGATAGCAGAACCTGAGACCAAAGTTGTTAAAATTGAATCTCATCATGACTTGTTAATCTTAGCTTCAGATGGATTATGGGAAAAGGTTAGTAATCAGGAAGCAGTAGATATTGCTCGTTCTTTTTGTGTAGGGAGCAACACACAAGGTTCTTTTAAGGCTTGTAAGAAACTTGTAGATTTATCTGCATCACGAGGCTCTATCGATGATATAAGTATAATGATCATCGAATTACAGAACTACATTTGA 969 0.3891 MSCSVAVSNSNVFSLSSPCHFSLPSPVLKRHRPAKLHIPVASLTVEVLPPVPSPTPAKDVVEVEGIGFSVYCKKGIRKQMEDRYSASVNLHGESKQAFFGVFDGHGGTKASEFAAHNLEKNVLEVIKSDYESDIEEAVRNGYLKTDSDFLKEELNGGSCCVTTLIRNGNLIVSNAGDCRAVISRGGVAEALTSDHKPSRIDEKERIETQGGYVDMCRGVWRIQGSLAVSRSIGDRHMKQYVIAEPETKVVKIESHHDLLILASDGLWEKVSNQEAVDIARSFCVGSNTQGSFKACKKLVDLSASRGSIDDISIMIIELQNYI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00875 322 ProSitePatterns PPM-type phosphatase domain signature. 98 106 IPR000222 GO:0043169
Tsu03g00875 322 Pfam Protein phosphatase 2C 68 311 IPR001932 -
Tsu03g00875 322 SUPERFAMILY PP2C-like 62 320 IPR036457 -
Tsu03g00875 322 CDD PP2Cc 66 306 IPR001932 -
Tsu03g00875 322 Gene3D - 65 321 IPR036457 -
Tsu03g00875 322 ProSiteProfiles PPM-type phosphatase domain profile. 67 318 IPR001932 -
Tsu03g00875 322 PANTHER PROTEIN PHOSPHATASE 2C 14 321 IPR015655 GO:0004722|GO:0006470
Tsu03g00875 322 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 14 321 - -
Tsu03g00875 322 SMART PP2C_4 57 316 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00875 Tsu-Chr3 8031053 8032436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00875 9 322 PP2C-type Phosphatase Gene Family AT2G30020 60.991 2.08e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00875 K17506 - gmx:100818903 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00875 03 8031053 8032436 Tsu05g02857 05 38779256 38782445 PCT