Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00873 atgaCTAAACTGTACATTTTATTACTCTTTTCTATTCAAATTTTGTTGCATGCATCAATATCAAACAGTGGTAAAGTTCCAGCTATAATTGTTTTTGGAGATTCTTCAGTTGATTCAGGTAACAATAATTTCATTCCAACAATAGCAAGAAGTAATTTTCCACCATATGGTAAAGATTTTCCAAATGGAAATCCAACTGGTAGATTTTCAAATGGAAGAATTCCACCTGATTTCATTTCTGAAGCATTTGGACTTAAACCAACTGTTCCAGCTTATTTAGATCCTTCTTATAGTATAAGTGATTTTGCTACTGGTGTTTGTTTTGCTTCTGCTGGTACTGGATTTGATAATGCTACTGCAAGTGTTGCTGATGTCATACCTTTATGGAAAGAAGTTGAGTTCTATAAAGACTaccaaaataaattaagagcaAATTTTGGTGATAAGAAAgctaatgaaataataaaagagTCATTATATTTGGTTAGCATAGgaacaaatgattttcttgAGAATTATTACACACTTCCTCAAACAAGGATGCAATATAAAACTGTTCAAGAATATGAAGATTTTTTAATTGGACTTGCTGATAATTTCCTTAGGGAAATTTATTACCTTGGAGCAAGGAAAATTTCTCTGACAGGGTTACCTCCTATGGGGTGTCTGCCACTTGAAAGGGCCATAAATATTTTGGACCTCCATAGTTGTGTTGATTATTACAATGATGTGGCTTTGGAATTTAATGCAAAATTGGGATGTTTAGTCACAAAGTTGAACAAGGAGCTCAATGGATTTCAATTGGTAGATGCAAGTGCATATGATATGGTCCTGCAAATTGTTACACATCCTTCTCAATATggtttTGAAGATGCAAGAGTGGGGTGCTGTGGAACAGGTAACAACAATTTTATTCCAACAATAGCAAAGAGCAATTTTGCACCATATGGTAGAGATTTTCCAAATGGAATTGCAACTGGTAGATTCTCAAATGGCAGAATTGCCCCTGATTTCATCTCTGAGGCATTTGGACTTAAACCAATTATTCCTGCTTATTTGGATCCTTCTTATAATATTTCTGATTTTGCTACTGGTGTTTGTTTTGCTTCTGCTGGTACTGGATATGATAATGATACTGCAAAAGTTGTTGATGTCATACCTTTATGGAAAGAAGTTGAGTTCTACAAAGACTACCAAAAGAAATTGAGAGCAAATTTTGGTGATATGAAAgctaatgaaataataaaagactctttatatttaattagcataggaacaaatgattttcttgAGAACTATTACACACACCCTGAAAGAAGGTTACAACATTTGACTATTCAACAATATGAGGATTTTTTAATTGGACTTGCTGAGAAATTCCTTAGGGAACTTTATGACCTTGGAGCAAGGAAAATTTCTCTATCAGGGATACCTCCTATGGGGTGTCTGCCACTAGAGAGGGCTATAAATATTTGGGGCCACCATAGTTGTATAGATCATTACAATGATGTGGCTTTGGAATTTAATGCAAAATTGGGATGGTTAGTCACAAAGTTGAACAAGGAGCTCAATGGATTTCAATTAGTAGATGCAAGTGCATATGATATGGTGCTGCAAATTGTTACTAATCCTTCTCAGTTTGGCTTTGAAGAAGCAACAATAGGGTGCTGTGGAACAGGTAGATTTGAGATGGGTATCTTTTGTGATGCAGAAAGCCCATTTACATGCAAAAATGCAAATAACAACCTAATCACCGCTTTGCTATCATTTCCGAAGCCATCACGTTGCTGCAGCCAGCAAGTAGCTATCCTCGTAACGGAACGCCGTTCTCCGGACAACAGATATGAACTCAGTTGTAAGACAGGCATACGAGTGGATGTCAGAAATGGAAACCTGGAAGGGGCATTGACATTGATGCAGCGTAAGATGACATCAAGTGGGATAGAGAGGATGATAAAGCACGAACAGAGATTCCATATAAAAAACTCTGAGAAACGTGTTTTAGCCCAAAAGAGCTTGGTGCGTAGGCTTCGATCAGAAGATCTTGCTAGGAAACTCAAGTCCATCATGATCAAGAAAGTCAGGGGTCTTTGA 2094 0.3486 MTKLYILLLFSIQILLHASISNSGKVPAIIVFGDSSVDSGNNNFIPTIARSNFPPYGKDFPNGNPTGRFSNGRIPPDFISEAFGLKPTVPAYLDPSYSISDFATGVCFASAGTGFDNATASVADVIPLWKEVEFYKDYQNKLRANFGDKKANEIIKESLYLVSIGTNDFLENYYTLPQTRMQYKTVQEYEDFLIGLADNFLREIYYLGARKISLTGLPPMGCLPLERAINILDLHSCVDYYNDVALEFNAKLGCLVTKLNKELNGFQLVDASAYDMVLQIVTHPSQYGFEDARVGCCGTGNNNFIPTIAKSNFAPYGRDFPNGIATGRFSNGRIAPDFISEAFGLKPIIPAYLDPSYNISDFATGVCFASAGTGYDNDTAKVVDVIPLWKEVEFYKDYQKKLRANFGDMKANEIIKDSLYLISIGTNDFLENYYTHPERRLQHLTIQQYEDFLIGLAEKFLRELYDLGARKISLSGIPPMGCLPLERAINIWGHHSCIDHYNDVALEFNAKLGWLVTKLNKELNGFQLVDASAYDMVLQIVTNPSQFGFEEATIGCCGTGRFEMGIFCDAESPFTCKNANNNLITALLSFPKPSRCCSQQVAILVTERRSPDNRYELSCKTGIRVDVRNGNLEGALTLMQRKMTSSGIERMIKHEQRFHIKNSEKRVLAQKSLVRRLRSEDLARKLKSIMIKKVRGL 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00873 697 Gene3D SGNH hydrolase 304 585 IPR036514 -
Tsu03g00873 697 Gene3D SGNH hydrolase 15 303 IPR036514 -
Tsu03g00873 697 CDD SGNH_plant_lipase_like 27 304 IPR035669 -
Tsu03g00873 697 PANTHER GDSL ESTERASE/LIPASE EXL3 299 583 - -
Tsu03g00873 697 PANTHER GDSL ESTERASE/LIPASE EXL3 3 300 - -
Tsu03g00873 697 CDD SGNH_plant_lipase_like 299 581 IPR035669 -
Tsu03g00873 697 Pfam GDSL-like Lipase/Acylhydrolase 29 302 IPR001087 GO:0016788
Tsu03g00873 697 Pfam GDSL-like Lipase/Acylhydrolase 315 561 IPR001087 GO:0016788
Tsu03g00873 697 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 299 583 - -
Tsu03g00873 697 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 300 - -
Tsu03g00873 697 Pfam Ribosomal protein S21 625 678 IPR001911 GO:0003735|GO:0005840|GO:0006412
Tsu03g00873 697 SUPERFAMILY SGNH hydrolase 418 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00873 Tsu-Chr3 7993448 8008083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00873 299 557 Pollen Coat Proteome AT1G75910 37.931 7.07e-53 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00873 - - gmx:100778745 481.87