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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Tsu03g00871
ATGCTTGCTGCTATCATTTCATTGTTACTTGTAATTctctttgttcttcttcttcatctttatGCTAAATGGTTCTTATCACAAGCACATGCTCAAGCACAAGCTCGTAGACGCCGTCGTCGAAGAACAACTGTTACTGTCTCTGATGTTCTTGGTCCTGCAAGGTTTCATCATTTCCATAGCTTCAATATTGAAGACTCACCACTTTCTAGCTCAAATACTAAAGGACTTGATTCTTCTATCATTGCTTCAATTCCTTTGTTTATTTATGCAGATAAGATTcaaaagaatgaaattgaaCAAGAACTTGAATGTGTTATTTGTTTGAGTGGTTTTGAAAATGGTGAAATGGGAAGGTGTTTACCAAAATGTGGACATGGTTTTCATGTGGAATGTATTGATATGTGGTTGAATTCACATTCTAATTGTCCTATTTGTAGAGCTTCAATTGTTGTTTTTGAGAATGATTCTTCAAGTAATGTTGTTGATGGTTCTTCTAGTTTTGTTGAAATTGTGATTGATGAAAATTCTAGTTCTGAGATTAGAGAGGGGGAAGAACAAGTGAATGAAAATGATAATGGAAGAGTACAACTACAGAGTGATTCTGTTTCAGAAAATTCATCTTTGTTTGGTTGTTCTTTGAAGACAGTTTTCAGCAAAGTTTTTCCATCTTCCAATGTTAATGAATCACAATCTTGA
699
0.3233
MLAAIISLLLVILFVLLLHLYAKWFLSQAHAQAQARRRRRRRTTVTVSDVLGPARFHHFHSFNIEDSPLSSSNTKGLDSSIIASIPLFIYADKIQKNEIEQELECVICLSGFENGEMGRCLPKCGHGFHVECIDMWLNSHSNCPICRASIVVFENDSSSNVVDGSSSFVEIVIDENSSSEIREGEEQVNENDNGRVQLQSDSVSENSSLFGCSLKTVFSKVFPSSNVNESQS
232
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Tsu03g00871
232
Pfam
Ring finger domain
104
147
IPR001841
-
Tsu03g00871
232
SMART
ring_2
105
146
IPR001841
-
Tsu03g00871
232
SUPERFAMILY
RING/U-box
91
153
-
-
Tsu03g00871
232
CDD
RING-H2_EL5_like
104
147
-
-
Tsu03g00871
232
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
57
152
IPR013083
-
Tsu03g00871
232
PANTHER
RING FINGER DOMAIN-CONTAINING
1
231
-
-
Tsu03g00871
232
ProSiteProfiles
Zinc finger RING-type profile.
105
147
IPR001841
-
Tsu03g00871
232
PANTHER
CHROMATIN REGULATOR PHD FAMILY-RELATED
1
231
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Tsu03g00871
Tsu-Chr3
7974731
7975429
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Tsu03g00871
1
195
Rapid Response to Elicitors
AT3G16720
36.893
2.57e-34
123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Tsu03g00871
-
-
lang:109329145
261.536
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Tsu03g00871
03
7974731
7975429
Tsu03g00871
03
7974731
7975429
ECH
Tsu03g00871
03
7974731
7975429
Tsu05g02872
05
39017740
39018423
PCT
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