Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00869 ATGGAATACAACAAGTTCAGAATTCGAAGCTATGAGTGTCAATCTGATAGAGCTCAAGTTGAAAATCTTGAGAGAAAATGTGAGGTAGGACCATCAGAAAGTGTGTTTCTCTTCACAGATACTATGGGTGACCCCATTTGTAGGATTCGAAACAGTCCCATGTACATGATGCTGGTAGCAGAATTGGAAAATGGATTGGTTGGTGTCATTCAAGGCTCTATAAAAGTTGTAACTATTCAAGGACATCCACCAAAAGATTTGGCAAAAGTAGGGTATGTCTTAGGCTTAAGGGTATCTCCACATCATAGAAGAAAAGGGATTGGTTCAAGCTTAGTAAGAACATTAGAAGAATGGTTCATTTCCAATGATGTGGACTATGCATATATGGCAactgaaaaagaaaatcatgcCTCAGTTAATCTCTTCATGAACAAATTTGGCTACACAAAATTTAGGACACCATCAATTCTTGTTAACCCTGTTAACCATCATTCATTTAAAATCTCAACCAACATTGAAATATCAAGGTTGAAAATTGAACAAGCTGAATCACTCTATAGAAAGTTCATGGGGTCCACAGATTTTTTTCCTAATGATATaggaaatatattaaaaaataagctaagTTTGGGGACATGGATGGCATATTTTAAAGATGATATTAATATTGGGCCTAATGGACAAATACCAAATAGTTGGGCTATGCTTAGTGTTTGGAATAGTgGGCCATTTTCAGGGAAGCTAGTGAGAGCTTTATGTAAATTTGTGCACAATATGGCTAAAGAGTCTAAAGATGAGAAGTGTAAGATTATTGTGACTGAAGTTGGAGGAAGAGATGAACTCAATCATCATAATATTCCACATTGGAAATTGCTTTCATGTCCTGAAGATTTGTGGTGTATAAAGGCATTGAAAAGTGAAGGGCTTTCAATCAATACTTTTCATGAATTAACAACTAAAACCCCACCAACAAGAGCTCTTTTTGTAGACCCTAGAGAGGTTTAA 1005 0.3463 MEYNKFRIRSYECQSDRAQVENLERKCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAELENGLVGVIQGSIKVVTIQGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVRTLEEWFISNDVDYAYMATEKENHASVNLFMNKFGYTKFRTPSILVNPVNHHSFKISTNIEISRLKIEQAESLYRKFMGSTDFFPNDIGNILKNKLSLGTWMAYFKDDINIGPNGQIPNSWAMLSVWNSGPFSGKLVRALCKFVHNMAKESKDEKCKIIVTEVGGRDELNHHNIPHWKLLSCPEDLWCIKALKSEGLSINTFHELTTKTPPTRALFVDPREV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00869 334 Pfam Acetyltransferase (GNAT) family 47 148 IPR000182 GO:0016407
Tsu03g00869 334 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 173 IPR000182 GO:0016407
Tsu03g00869 334 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 242 334 - -
Tsu03g00869 334 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 242 - -
Tsu03g00869 334 Gene3D - 14 155 - -
Tsu03g00869 334 CDD NAT_SF 57 128 - -
Tsu03g00869 334 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 152 IPR016181 -
Tsu03g00869 334 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 242 334 - -
Tsu03g00869 334 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00869 Tsu-Chr3 7951441 7953375 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu03g00869 Acetyltransf_1 6.7e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00869 - - gmx:100799507 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00869 03 7951441 7953375 Tsu03g00869 03 7951441 7953375 ECH