Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00859 ATGGAAAAAGAAATTGTGCAGCAAAAAGAACAGCCAGGGccttcaaaatcaaacatattGAGGCCCTTCTCAACCGGTCCTTCAGCATTTCGACCACGGCAACCCTCTTTGAAGAGTGACCTTGGTAAAGAAGAGGCAAGCAACATTATAGTAAATCTTGGTCATGTTGAGAAGAACCAGAACAATGTTGGTAGTGCAACTGTAGGTGTTGATGTTGATGATCAAGCTCAACACAAAATGGATCCGAAGAGACTCAAACGAATCCTAGCACATCGAGCTGCTGAGAAAAGATCCAGAACGAGGAAAGATGAGCATATGGCACATTTGGAACGGatgcaaaaatattttcagGATACATTATCTTCTCTTCATTCACAAATTGAAGGTGATAAAAATAAGAAGTGGTTGTTGCAGATTGAGCACCACCAATTGGAACTTGAAATTGCTGTTCTTCACAAAAAAGCAATACTTAGAGAAGTGGAGATTGAAAGGAATCAAGCTGAGGTGAATAGGCTAATGGAGCTTAAGAAAAAACAAGAAATAATGCTGAAATTTGAAGACTCAATTTGTCCTAAGAAACTGCACACACTTAGTCCTTTATCAAATGGTTCTTCAGCATTTCGACCATGGAAACCCAATTTGAAGAGTAGCCTTGGTAAAGTAGAGGCAAGCATCAATGGTGGTAGTGCATGTAAAGGTGGTGGTGATAAAGTCCAACAAAAAATGGATCCTATGAAACTCAAACGAATCCTAGCTAATCGAGTTTCTGCACGAAAATCGAAGGAAAGGCAAAATGAGTATATTGCAAATTTGGAACGGATGACAAAATCTTTTCAGGATAAATTATCTTTTCTTCATCCACAAATGGAAGCTTATAAATATGAGAAGTGGCTTTTGGAAATTGAGAACCACCAATTGAAACTCGAAATGGCTATTCGTGAAAAAGAACGAATACTTGAAGAAGTGGAGATTGAAAAGAAGCAAGTTGAGAAGAATAGGTTGTTGGAGCTTCAACGAAAACAAATATTTGAAGAACAAACAAAGATGCATATAACAAGGAGTGCTGCTAAACATCTTCTGTCCAATTCAATTGCATAG 1098 0.3716 MEKEIVQQKEQPGPSKSNILRPFSTGPSAFRPRQPSLKSDLGKEEASNIIVNLGHVEKNQNNVGSATVGVDVDDQAQHKMDPKRLKRILAHRAAEKRSRTRKDEHMAHLERMQKYFQDTLSSLHSQIEGDKNKKWLLQIEHHQLELEIAVLHKKAILREVEIERNQAEVNRLMELKKKQEIMLKFEDSICPKKLHTLSPLSNGSSAFRPWKPNLKSSLGKVEASINGGSACKGGGDKVQQKMDPMKLKRILANRVSARKSKERQNEYIANLERMTKSFQDKLSFLHPQMEAYKYEKWLLEIENHQLKLEMAIREKERILEEVEIEKKQVEKNRLLELQRKQIFEEQTKMHITRSAAKHLLSNSIA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00859 365 PANTHER ACTIVATOR OF SPOMIN LUC3 32 180 - -
Tsu03g00859 365 Coils Coil 162 182 - -
Tsu03g00859 365 PANTHER BASIC LEUCINE ZIPPER 34 32 180 - -
Tsu03g00859 365 MobiDBLite consensus disorder prediction 10 32 - -
Tsu03g00859 365 PANTHER BASIC LEUCINE ZIPPER 34 210 348 - -
Tsu03g00859 365 SMART brlzneu 241 305 IPR004827 GO:0003700|GO:0006355
Tsu03g00859 365 SMART brlzneu 79 150 IPR004827 GO:0003700|GO:0006355
Tsu03g00859 365 SUPERFAMILY Leucine zipper domain 246 299 IPR046347 GO:0003700|GO:0006355
Tsu03g00859 365 Coils Coil 294 339 - -
Tsu03g00859 365 MobiDBLite consensus disorder prediction 1 43 - -
Tsu03g00859 365 Gene3D - 246 350 - -
Tsu03g00859 365 PANTHER ACTIVATOR OF SPOMIN LUC3 210 348 - -
Tsu03g00859 365 CDD bZIP_plant_RF2 246 296 IPR044759 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00859 226 321 bZIP Transcription Factor Family AT2G42380 32.990 4.03e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00859 - - lang:109356469 87.0409