Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu03g00840 | ATGGGATCAGGTTCTTCACCTTGTGCTTCTTGCAAATTGTTGAGAAGGCGTTGCACACAAGAATGCATCTTTGCTCCTTATTTTCCTTCAGATGATCCACGCAAATTTGCCATTGTTCATAAGGTCTTTGGTGCTAGCAATATCAGCAAAATGTTGCAGGAACTTCCAATTCATCAAAGAACAGAAGCAGTAAACAGTTTAGTTTATGAAGCAAATGCAAGAGTTAGAGATCCTGTTTATGGATGTGTTGGAGCAATATCATACCTTCAAAGTCAAGTTTCACAATTACAAATGCAACTTGCAGTGGCTCAAGCAGAGATACTCTGCATCCAGATGCAACAAGATTCTGCTACTGTTACTGACTCATTACCAACACATGTTGACCAAGATGACAAATTGATGCTCTTATCTGAAAATAATAATTGCTATGGAGTCCTTCCACAATATCTCAActttccatcttcttcttcatcatcttctaaTGTATTTCAAGATTATGAGCCTCTTAAGAGAGAGACTTTTTGGACTTAA | 531 | 0.3578 | MGSGSSPCASCKLLRRRCTQECIFAPYFPSDDPRKFAIVHKVFGASNISKMLQELPIHQRTEAVNSLVYEANARVRDPVYGCVGAISYLQSQVSQLQMQLAVAQAEILCIQMQQDSATVTDSLPTHVDQDDKLMLLSENNNCYGVLPQYLNFPSSSSSSSNVFQDYEPLKRETFWT | 176 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu03g00840 | 176 | Coils | Coil | 86 | 106 | - | - | |
Tsu03g00840 | 176 | PANTHER | LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN | 1 | 173 | - | - | |
Tsu03g00840 | 176 | Pfam | Lateral organ boundaries (LOB) domain | 7 | 104 | IPR004883 | - | |
Tsu03g00840 | 176 | ProSiteProfiles | LOB domain profile. | 6 | 107 | IPR004883 | - | |
Tsu03g00840 | 176 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 1 | 173 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu03g00840 | Tsu-Chr3 | 7632951 | 7634353 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu03g00840 | 2 | 176 | AS2 family | AT2G30130 | 63.351 | 2.47e-77 | 227 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Tsu03g00840 | LOB | 3.8e-42 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu03g00840 | 03 | 7632951 | 7634353 | Tsu03g00840 | 03 | 7632951 | 7634353 | ECH |