Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00832 ATGGAGGGTTGCCTAACAGATTTGGGGAAGACATTTGCAGAGAAATTGATAAACGGTGTAATACAAAAATCGCGTTATCTATTTTGCTTCAAGTGCATTGCTAACGATTTCGaatcagaaaagaaaaacttgGAAGCAGAATGGAAAACTATGATACAACGTTTTACAAAGGCAAATGAAAATGGTAAAGATATTAAATATAATGCTAAATTTTGGGAAGAGGAAGCTAATAAGCTCATTCAAGAGGACACTAAGTTAAAGCAAAgatgtttttttggattttgccccgaTTGCATATGGCGATATAAAAGGGGAGAGGAGTTGGCAAACAAGATACAGAAAATTAAAGAATTGATGGTAATGGTAGGGAATCTTGAAAATGTTGAACTCCCTCGTAGTCTTCCAGATGTTGAGCGTTATTCTTCTCAATCttacattttgtttaaaagtaGGGAGTTGAAATACCAAGAGCTTTTGGATGCACTAAAAGATGACAGTTACTATATGATTGGATTGCATGGGATGGGGGGCACAGGTAAAACTACAATGGCAAAAGAAGTGGGAAATCAACTTAAGGATTCAAAGCAATTCAATCGTGTCATCATTACTACAGTGTCGAATACTCCTAATATAAAAAAGATTCAAGATGATATTGCTGGATCCTTGGGATTGGTATGGAAGGACAAGAATGAGTCAAACAGGCCTAAAGAGCTATGGAACAGACTAACCAATGGTGAGAAAATTCTTGTGATATTGGATGATGTTTGGGGTGATCTCAATTTTGATGACATAGGGATTCCAAATAGTTATAATCACAAAGGATGCAAAGTTCTTGTAACCACACGATATCTGAAGGTATGCAAAAAAATGGCATGTGGAGAAACAATTCAACTAGAGCTCTTATCTAAAGAAGAGGCATGGGACATGTTCAAAATTCATGCTGATCTAAGTAATATTTCCTACAAAGATATTCTCAACCAGGGACGCAAAATTGCAGATGAATGCAAAGGATTACCAATTGCAATTACTACTATCGCCAGCAGTTTGAAGGGAGAGAAAAGTCAAGCAGAATGGGATGCTGCCTTAACGTCCTTACAAAGTCCAATGTCAATGGGTGATATCGTTAATGATGAGTTGGTTGACATTTTTAAATGTTTGAAGGTTAGTTATGATTTTCTGAAGGACAAAAAAGCCAAGGAATTGTTCCTCTTATGTTCAATATtccaagaagatgaagaaatctCTACTGAAATTCTAACCAGACTGGGCATAGGAGTCGGCCTCTTTGGGGAAGGTTATGGCAAATACAACATTGCTCGAAATCAAGTAGTTGTAGCCAAAAATAAACTCCTTGATTCATGTTTATTGATGAAGACAAATAAAGGAGATGTAAAAATGCATGACTTGATTCGTGAAGTAGCCCAATGGATTGCGAGCAAAGAGATTCTAGCAGTAGATACTTCcaacaaaaatcaaaagtcATCATTAATTGGAAGGgataataatatcaaatatttgttatttgatgGAAATCCAATGGATTTGTGTTCCTCTAggtttgatggttctaaacttGAGATTCTGATTTTAATGGTCACAGGTTGCTTTGTGGattcattctttgaaaatattgCAGGGCTTCGAGTTTTGAATTTAATAGCAGGTGAAGAATTTACTTTATCATTACCACAATCAATTCGGTCATTGATCAACATTCGTTctctattaattaaaaatgtcgaTTTGGGTGACATCTCTGTTTTGGGAAGCCTGCAAAGTCTTGAGACACTTGATTTGAATCGTTGTTCAATTGAAGAACTTCCACAAGAAATTGCTGAAATGAAGAAACTTAGATTGTTGAACTTGAAATTCTGTAGAGTTAAACGTAATAATCCATTTGAAGTTATCCAAAGATGCCCATCACTTGAGGAATTGTACTTCTGGAATAGTTTCAATAAGTTTTGTCAGAAAATAACCATACCTGCATTGGAAAGGTATCTACTCATTCATGATTTTCGTAAAATGCACGATTTTTCACCATCAAAATACGTGTCTCTTCGACGTGATTATTTGTCAGAAGCAACATTTAAGCATGTGATTCAAACAGCAGAGATTCTTAAATTGCAAAGAATTAAGAAAGGATGGATAAATCTCATACCTGAAATTGTTGGTATAGATCAAGGTATGAATGATCTAATTGAGCTTCGTTTGAAATATGATTCACATCTACAATGCCTCGTAGACACTGAACATATTGATTCTCAAGTACCAAATGTCTTTTCCAAGTTGGTTGTACTAGAACTCGGGGAAAtggaaaatttgaaagaatTATGCAATGGTCCCATCTGCTTTGACTCTTTGAGCAATTTAGAGAAGCTGTATATCGACAATTGTGAAGATTTGGGAAGTTTGTTTAAATGCAGCCTAAATCTATGCAATTTAAAGATTGTGAGTCTAAGTAGATGCTCTAAATTggtttctgtttttgatttgtcAACTTCTCAAAGTCTGGTGCTGCTGGAGAGATTGTCAATTAGTCGTTGTGAGCAATTGgaaaacatattttcaaatgatggtgataatgataataacaaGAGGTGTaactcattgtttccaaagctggaatctatatatatattacgtTGTTATAAGCTGAAGTACATATTTGGCCAACACCAAGATGTTGAACTCGCATCACTAAAAGAGTTGAAGCTGCATGATCGGCCAAATTTCATTGACATATTTCCAGAATCAAATCATTCCTTTGAAGGGTCATCTCATTCCATTTACAAGCCACAAACAGAATTGGAGGTGGAGCCTATCAAATCCAATAAGTTCCCATGGAGTCATATGTGTTGTTATGGACATAAATTGAGGGGTAGCAGTAGCAGCACAAGTACTAAAGTTCCATTCCCATCGGTTTATGAGGATGAACCGCAACACTGCTCAATCTCATTGGAATCATATTGTCTTTTAAGGCTGTCACATGTCGTGTGCAATATTAAAAAGATAACATTGACGAATATTTCAAAGATAAAATCAGTGTTTATGTTGTCTATTGCACCAAAAATGTTGTCATTGGAGAGCTTGACTATTACAAATTGTGGTGAATTGGAGCACATAGTAGTAGACATTGGTGATGGCAGCGGTACTGGGGTCAATATTGTCTTCCCAAAACTAAAAGAGCTCACTGTTATTGGCTGTAAGAAATTGGAATACATATTTGGACACATTAATGCTAGTGATCTTCAAAACTACCTTCGTCTTCCAGCTTTGATATCTCTCTATCTTTCCAGTCTTCCAAGTTTAATCGGCATGGGTACCAAAAACTATCACATGATGCTGTCACACTTGGGGGACATTACACTCATTGGATGCCCCCATGTTGATAATAAATCTTTTGGTGATTTTGTTTATCAGATGTCAAAATCTCAGGACAGTACAACCATTAAGGATTTGAGTGGAAATGATTTGGAAGCTCATCTTGCTTTGAAAAAACTCAGGGCAGAAAACTCTAAATTTCAATACATCTTTTATCTCGATGAAATAAATGGACAACAAAGGAACTTAGGATTGCAAGACATTAAATTACGTGATCAGCATCAGATGACATGCCTTTTTTTGATTGATCTAATAATAGAAGAATGTGATGGGTTGAAGTATAtcattgaagaagatgatgctGATGATCATGCGGAGAATAAAGAAATATCAAATTATCATATGTCTCCAATTAGGGCATGCTTTCCAAAGCTTAGAACAGTTTGTGTCGTAAAGTGTAACAAGTTGAAATATGTACTTCCATCCTCCATGTGTACAGAGCTTCCGAACCTATGGTTACTCATGATAGGAGAAGCATCTAAGTTAGAGAAAATATTCGGAGGAAGTGAAGAAAAAGTTGGCAGGTTTCCAAATCTATATGCTGTAGTATTTGTCGAACTACCAAGCTTTTTTCAGGGAATCCAATTCCAAACTGTACAACATCGTCTTGTACACAATTGTCAAAATCTCTCTTTGACTTCAACATCAACTGACGTTTTATCAACTCTCATTTACACTTGTTATGATAAATTAgATAATGATGTGAGCGCATATATGCGGAGTGTGAACAAACAGTTAGAAGAACATTCAGAAATAGAGGATCCGAGTACTTCAGAAACAGAGGATCAATCATCAACATCTGGAAGTGAAAATGCCGTTGAGGATCACAGTACTTCAGAAATAGAGGATCAAAGTATTCACGAGGGTTCTACTTCAGAAACAAGGAATAAGCCACCTATGCAATTAGTTGCTGATCTTAAACAAAAGAATACCAAGTTAAGTTTGGAAGATGTTGATCTTGATGACTCTAAAGAAACAACTCAGACTAATAATGAAGTGGACTCTTCTAAAGAAGAATCTGAATCAACATCAAGGCACAAGTTGACTTCTTCACAGATACAAAAGAAACAAGAAGCAGAGACAGAGCATGAGTTTGTTGAAAATGTTCCTGATTTAGAGATACCACCACTAGCAATATTACCAACAAACTCAGAAGAGTTGGTGAATCCACAACAGTCAGTTGCAGAAATCGATACTACCGTCAAACCTTCTCAGGACcataatTTGGAGGGTTCTACATCAGAAAAAACAGCAGCAGAAACTTTGTCCATCAGTTCAGAAACAAAAAATGAGCCGCCTATCCAATTAGATATTGATCTTAAACAAAAGGCATTTCCCCTATTTTGcttgtattattttttgacttttttcaatctaggaattgaattgaattataaTACAATCTTAATTTTTAAGCAGGATATCGAGATAAGTGTTGAAGAAGGAACTACATCGACTATTCCTATGGAAGACATTAACAATCTGATGGAAGAAGACCCACTTCTCGCACTTGTTGCACTCGAGAATCTTCTTACAAGACAAGCCTCGATTTCCTCCATTCGAGTTTTACTTCAAGAATTGAAGACTTTGATGGACTCATCATCAGACCTTGATCATCTTGTATCGAATCAAGAGtctaaattgaaattgatttctctttttcatcaattGAATCAGCATCAAAGGATGTTAACTTCTGACGAGAAGGACTTTGTTGAGAAGGTTCAGAACTTCTTCATTGACAATATTATCAAACACAACACTTCTCAGAAATTACTCAAGAAGTACAACCAAGTTCTTGATTCGAAAACCGATCTCATGAACAAGCTTCGGAGTGCAAAGAATGCACAAACCAACATTGACAGTGAAACTTCAACCACCAATGCTCAGATACATGAGCTCTCTTTACAAACTGATGAACTTAGAAAAAAGTTGGCAGATCTTGAGAATCAAATAGATGGTTTGAAGTCGGTAGCGAAGCAACGCGATGTTCAAAAGATGAAGTTGAAGGCTGAATGCTCAGAGTTGGCCCAACAAAGTAAAGAACTACTTTCTGCACTTACTTCATTGGAGGTCGACATAAGAGAAGCTGAACGTGCGAGGAATTTGGCAAAAGAAGGCTTTGCAAATTTAAAATCATCATTTCCTGCATTTTAG 5538 0.3409 MEGCLTDLGKTFAEKLINGVIQKSRYLFCFKCIANDFESEKKNLEAEWKTMIQRFTKANENGKDIKYNAKFWEEEANKLIQEDTKLKQRCFFGFCPDCIWRYKRGEELANKIQKIKELMVMVGNLENVELPRSLPDVERYSSQSYILFKSRELKYQELLDALKDDSYYMIGLHGMGGTGKTTMAKEVGNQLKDSKQFNRVIITTVSNTPNIKKIQDDIAGSLGLVWKDKNESNRPKELWNRLTNGEKILVILDDVWGDLNFDDIGIPNSYNHKGCKVLVTTRYLKVCKKMACGETIQLELLSKEEAWDMFKIHADLSNISYKDILNQGRKIADECKGLPIAITTIASSLKGEKSQAEWDAALTSLQSPMSMGDIVNDELVDIFKCLKVSYDFLKDKKAKELFLLCSIFQEDEEISTEILTRLGIGVGLFGEGYGKYNIARNQVVVAKNKLLDSCLLMKTNKGDVKMHDLIREVAQWIASKEILAVDTSNKNQKSSLIGRDNNIKYLLFDGNPMDLCSSRFDGSKLEILILMVTGCFVDSFFENIAGLRVLNLIAGEEFTLSLPQSIRSLINIRSLLIKNVDLGDISVLGSLQSLETLDLNRCSIEELPQEIAEMKKLRLLNLKFCRVKRNNPFEVIQRCPSLEELYFWNSFNKFCQKITIPALERYLLIHDFRKMHDFSPSKYVSLRRDYLSEATFKHVIQTAEILKLQRIKKGWINLIPEIVGIDQGMNDLIELRLKYDSHLQCLVDTEHIDSQVPNVFSKLVVLELGEMENLKELCNGPICFDSLSNLEKLYIDNCEDLGSLFKCSLNLCNLKIVSLSRCSKLVSVFDLSTSQSLVLLERLSISRCEQLENIFSNDGDNDNNKRCNSLFPKLESIYILRCYKLKYIFGQHQDVELASLKELKLHDRPNFIDIFPESNHSFEGSSHSIYKPQTELEVEPIKSNKFPWSHMCCYGHKLRGSSSSTSTKVPFPSVYEDEPQHCSISLESYCLLRLSHVVCNIKKITLTNISKIKSVFMLSIAPKMLSLESLTITNCGELEHIVVDIGDGSGTGVNIVFPKLKELTVIGCKKLEYIFGHINASDLQNYLRLPALISLYLSSLPSLIGMGTKNYHMMLSHLGDITLIGCPHVDNKSFGDFVYQMSKSQDSTTIKDLSGNDLEAHLALKKLRAENSKFQYIFYLDEINGQQRNLGLQDIKLRDQHQMTCLFLIDLIIEECDGLKYIIEEDDADDHAENKEISNYHMSPIRACFPKLRTVCVVKCNKLKYVLPSSMCTELPNLWLLMIGEASKLEKIFGGSEEKVGRFPNLYAVVFVELPSFFQGIQFQTVQHRLVHNCQNLSLTSTSTDVLSTLIYTCYDKLDNDVSAYMRSVNKQLEEHSEIEDPSTSETEDQSSTSGSENAVEDHSTSEIEDQSIHEGSTSETRNKPPMQLVADLKQKNTKLSLEDVDLDDSKETTQTNNEVDSSKEESESTSRHKLTSSQIQKKQEAETEHEFVENVPDLEIPPLAILPTNSEELVNPQQSVAEIDTTVKPSQDHNLEGSTSEKTAAETLSISSETKNEPPIQLDIDLKQKAFPLFCLYYFLTFFNLGIELNYNTILIFKQDIEISVEEGTTSTIPMEDINNLMEEDPLLALVALENLLTRQASISSIRVLLQELKTLMDSSSDLDHLVSNQESKLKLISLFHQLNQHQRMLTSDEKDFVEKVQNFFIDNIIKHNTSQKLLKKYNQVLDSKTDLMNKLRSAKNAQTNIDSETSTTNAQIHELSLQTDELRKKLADLENQIDGLKSVAKQRDVQKMKLKAECSELAQQSKELLSALTSLEVDIREAERARNLAKEGFANLKSSFPAF 1845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00832 1845 Coils Coil 69 89 - -
Tsu03g00832 1845 Coils Coil 1758 1785 - -
Tsu03g00832 1845 MobiDBLite consensus disorder prediction 1374 1426 - -
Tsu03g00832 1845 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 989 1070 - -
Tsu03g00832 1845 Coils Coil 1793 1834 - -
Tsu03g00832 1845 Gene3D Ribonuclease Inhibitor 520 677 IPR032675 -
Tsu03g00832 1845 Gene3D - 133 297 IPR027417 -
Tsu03g00832 1845 SUPERFAMILY RNI-like 988 1287 - -
Tsu03g00832 1845 Gene3D - 300 394 IPR042197 -
Tsu03g00832 1845 PANTHER - 103 917 - -
Tsu03g00832 1845 MobiDBLite consensus disorder prediction 1386 1401 - -
Tsu03g00832 1845 MobiDBLite consensus disorder prediction 1402 1417 - -
Tsu03g00832 1845 PANTHER - 989 1070 - -
Tsu03g00832 1845 PRINTS Disease resistance protein signature 242 256 - -
Tsu03g00832 1845 PRINTS Disease resistance protein signature 169 184 - -
Tsu03g00832 1845 PRINTS Disease resistance protein signature 335 349 - -
Tsu03g00832 1845 PRINTS Disease resistance protein signature 589 605 - -
Tsu03g00832 1845 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 103 917 - -
Tsu03g00832 1845 CDD AAA 155 281 - -
Tsu03g00832 1845 Gene3D Ribonuclease Inhibitor 969 1360 IPR032675 -
Tsu03g00832 1845 Gene3D Ribonuclease Inhibitor 681 858 IPR032675 -
Tsu03g00832 1845 Pfam NB-ARC domain 158 391 IPR002182 GO:0043531
Tsu03g00832 1845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 405 IPR027417 -
Tsu03g00832 1845 Coils Coil 34 54 - -
Tsu03g00832 1845 SUPERFAMILY L domain-like 465 911 - -
Tsu03g00832 1845 MobiDBLite consensus disorder prediction 1442 1490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00832 Tsu-Chr3 7576941 7584856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00832 170 509 WRKY Transcription Factor Family AT5G45050 24.930 2.26e-13 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00832 - - mtr:MTR_3g062420 1330.85