Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00831 AtgtcatcttcatcatcaccaATCTTCACCACCTtcctcatcatcatcctcatccaTTTCCACCCAACCTCATCATTCTCTCTCTCAGTACAAAATCCACAACAAAACACCATACTCTCACCCAACAACACATTCACAGCAGGTTTCTACCCAGTAGGCCAAAATGCTTACACCTTTGCTATTTGGTtcacacaaaaacacaaacaccTTAACAGCAACATCACAACCACCATTGTTTGGATGGCGAATCGCGATAAACCCGTTAACGGTAAACGCTCAACACTTTCCCTTCTTAAAACTGGTAACCTTGTCTTAACAGATGCAGCTCAATCCATTGTTTGGTCTACAAACACTGTCTCATCAAAACCATTACAATTACTTCTACATGAAACTGGTAACCTTGTTCTTCAAGAACAAAACACAAATAGTTCAATCAATAATAACACTATTTTATGGcaaagttttgattttccaaCAGATACACTTTTACCAAACCAACCCTTAACAAGATTTACCAATCTTGTTTCGTCAAGAAGCCAGACGAATTTTTCGTCTGGCTTCTATAAACTTTTCTTTGACAATGATAACAGTTTGGGACTTCTTTATGAAGGTCCAAGAGTTTCAAGTATTTATTGGCCAGATCCTTGGACTACTAAGAATGGTGCTGTTGGTAGTGGTACAAGATCAACTTTTAATAGTAGTAGAATTGCTTTGTTGGATTCATTTGGTAGATTTAGCTCTTctgataattttgtttttaatactTCTGATTATGGAACTTATTTGCAACGTTTAATTAGACTTGATCATGATGGTAATGTTCGCATTTATACTAGAAAAGATGAGGAACAAAGTTGGTTTGTTTCGGGTCAATTTCGTCAACAACCATGTTTCATTCATGGGATTTGTGGACCCAATAGTACTTGTAGTAATGATCCATTAACTGGTAGAAAGTGTTCTTGTCTACCTGGTTATGTTTGGAATAATGATCAAGATAATAGTGAAGGTTGTAGACCCAATTTTCAACTTTCTTGTAGTAATAAAAAGAGTCATGATGAGTCAAGGTTTTTGGCTTTACCTCATGTTGATTTTTATGGATATGATTATGGGTTCTATCCTAATAAAACTTACAAAGAATGTGAGGATATGTGCTTGAGTTTGTGTGGTTGTGTAGGATTTCAGTTTACTTTTAATGCTGATTTTGGTGGTAATTTTTGGTGTTACCCGAAAATTCAGTTACTTAATGGCCATCATTCTCAGAGTTTTGTTGGATCGTTCTACTTGAAATTGCCGAAAAGCAGTGGTTTTGTTGATGAAATGAGGATTCAGGAAAATGGATTGGGGATGGTTTGTGAGAGGAATGGAGTGGTAGAGCTTGAAAGAGATtacatgaaaaagaaagaaaatggtTCGTTGAAGTTCATGCTTTGGTTTGCTGGTGGTTTAGGAGGTGTTGAGCTTTTGGGATTTTTTCTGGTTTGGTTTTTCTTGTTTAGGAGCAGCAAAAATTCTGGTGAAGATAATCATGATTATGTTCTAGCAGCAACAGGGTTTAGGAAATTCAGTTACTCTGAATTGAAACAAGCTACAAAAGGTTTTAGTCAAGAGATTGGAAGGGGTGCTGGAGGATCTGTGTATACGGGTGTTTTATCTGATAATCGAATTGCTGCGATAAAGCGTCTGCATGAAGCAAATCAAGGAGAGAGCGAGAGTGAGTTTCTTGCTGAAGTTAGCATCATTGGAAGGCTTAACCACATGAATTTGATTGGTATGTGGGGTTATTGTGCAGAGGGAAAGCATAGATTGTTGGTTTATGAGTACATGGAAAAGGGTACTTTAGCCGATAATCTCTCATCAAACGAACTTGATTGGGGTAAAAGGTATAACATTGCTATGGGTACCGCAAAGGGTCTTGCTTATTTACACGAAGAGTGTTTGGAGTGGATTTTGCACTGCGATATAAAACCTCAAAACATACTTGTTGACTCTGATTACCAACCCAAGGTAGCGGATTTTGGTCTTTCTAAGCTATTGAATAGGGACGACCTTGATAATTCCAATTTCTCGAGGATAAGAGGGACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCAAATCACTTCTAAAGTCGATGTTTATAGTTACGGAGTTGTGGTGTTGGAGATGATTACTGGAAAGAGTCCAACAACAGGTATCCAAATCAAAGAAGAGTTGTGTCATGAGAGGTTGGTAACATGGGTTAGggagaaaaagagaaaaggaTTAGAAGTTGGTTGTTGGGTAGAACAAATTGTTGATCCTAGACTGGGATCAAATTATGATGTAAAGAAAATGGAGACTTTGGCAAATGTGGCTTTGGATTGTGTTGCAGATGATAAAGATGTTAGACCCACCATGAGTCAAGTAGTTGAGAGACTATTAAGTGATGAGCATAATTATTATTGA 2451 0.3554 MSSSSSPIFTTFLIIILIHFHPTSSFSLSVQNPQQNTILSPNNTFTAGFYPVGQNAYTFAIWFTQKHKHLNSNITTTIVWMANRDKPVNGKRSTLSLLKTGNLVLTDAAQSIVWSTNTVSSKPLQLLLHETGNLVLQEQNTNSSINNNTILWQSFDFPTDTLLPNQPLTRFTNLVSSRSQTNFSSGFYKLFFDNDNSLGLLYEGPRVSSIYWPDPWTTKNGAVGSGTRSTFNSSRIALLDSFGRFSSSDNFVFNTSDYGTYLQRLIRLDHDGNVRIYTRKDEEQSWFVSGQFRQQPCFIHGICGPNSTCSNDPLTGRKCSCLPGYVWNNDQDNSEGCRPNFQLSCSNKKSHDESRFLALPHVDFYGYDYGFYPNKTYKECEDMCLSLCGCVGFQFTFNADFGGNFWCYPKIQLLNGHHSQSFVGSFYLKLPKSSGFVDEMRIQENGLGMVCERNGVVELERDYMKKKENGSLKFMLWFAGGLGGVELLGFFLVWFFLFRSSKNSGEDNHDYVLAATGFRKFSYSELKQATKGFSQEIGRGAGGSVYTGVLSDNRIAAIKRLHEANQGESESEFLAEVSIIGRLNHMNLIGMWGYCAEGKHRLLVYEYMEKGTLADNLSSNELDWGKRYNIAMGTAKGLAYLHEECLEWILHCDIKPQNILVDSDYQPKVADFGLSKLLNRDDLDNSNFSRIRGTRGYMAPEWVFNLQITSKVDVYSYGVVVLEMITGKSPTTGIQIKEELCHERLVTWVREKKRKGLEVGCWVEQIVDPRLGSNYDVKKMETLANVALDCVADDKDVRPTMSQVVERLLSDEHNYY 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00831 816 CDD B_lectin 36 158 IPR001480 -
Tsu03g00831 816 SMART blect_4 29 158 IPR001480 -
Tsu03g00831 816 Pfam Protein kinase domain 534 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00831 816 ProSiteProfiles Bulb-type lectin domain profile. 23 149 IPR001480 -
Tsu03g00831 816 Pfam S-locus glycoprotein domain 259 326 IPR000858 GO:0048544
Tsu03g00831 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 814 - -
Tsu03g00831 816 SUPERFAMILY Protein kinase-like (PK-like) 510 808 IPR011009 -
Tsu03g00831 816 SMART serkin_6 531 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00831 816 Gene3D - 27 156 IPR036426 -
Tsu03g00831 816 Gene3D Phosphorylase Kinase; domain 1 498 607 - -
Tsu03g00831 816 CDD PAN_AP_plant 341 431 - -
Tsu03g00831 816 Pfam D-mannose binding lectin 77 170 IPR001480 -
Tsu03g00831 816 Gene3D - 157 287 IPR036426 -
Tsu03g00831 816 Gene3D Transferase(Phosphotransferase) domain 1 608 815 - -
Tsu03g00831 816 PIRSF SRK 1 815 IPR024171 GO:0004674
Tsu03g00831 816 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Tsu03g00831 816 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 9 814 - -
Tsu03g00831 816 ProSiteProfiles Protein kinase domain profile. 531 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00831 816 CDD STKc_IRAK 537 808 - -
Tsu03g00831 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Tsu03g00831 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 213 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00831 Tsu-Chr3 7572994 7575604 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00831 521 808 Trihelix Transcription Factor Family AT5G38560 43.345 1.80e-67 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu03g00831 Pkinase 4.7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00831 - - gmx:100806357 1057.74