Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00826 ATGGTGAAACATATTCATGGTTCAACAATTTCTTCTGTTTCCATTTTGTGTCAAGAACAATCAAATTTTCACCCTGGTGGTATTTTTTATGGTGACAATCCCTTAACTCACTCCTTCTCAATACTTATGTTCCACCTCATTCTTATTACCACCATCACACGTACTATTCGTTTTCTTCTTAAGCCTCTCAAACAACCTGTAATCATTTCTCAAAtaattGGTGGTGTCATTGTTGGACCATCCTTTCTAGGACGAAGTAAATGGTATCATCGACACGTGAAACCCGAGGCGGCGCAATTCCTAATGAACAACCTAGGAATTATGGGGTTCATGTTCTTTGTATTTGTCTATGGTGTAAAAATGGATCCAAGCTTAGTGAAAAAATCAGGAAAAATGCATGTATCGATAGCATTAACAAGCATAACAATTCCAACATTATTAGTATATATTGTAGCACTAAGTTTAAGAAAACAAATGGACAAAGAATTAAGTGCAATTTCATCAATAGGAGTAATAGCAGGATACTTAGGAATAACAGCATTTCCTGTTATATATCATGTCCTCAAAGAGCTTAACCTTCTAAACTCGGACGTGGGTCGATTTGCATTATCGACCGCATTAATCGGAGACACAATTGGAATGGGAAGCATTTTAGCATTTGAAGCAGAAAGACAAGGACAAATAAGAACAGAGAATGCTGTTTGGTTTATGCTTTCTGCTATAGTTTTAGTAACACTTTTATTATCTTGTGTTAGGCCAGCAATGCTATGGATTAATAGCAAAACACCAGAAGGAAAACCAGTGGATCAATCTTTTATAGTTGCAATTCTTTTAGGGATTTTTATGATGGGCTTTATAACTGATATGTTTGGTATAGCAATTGTTAATGGGCCATTGTGGTTGGGCTTAGTTGTTCCTGATGGGCCTGGTTTAGGAGCAACAATGGTGCATAGAAGCAAGACTTTTATGAATGAGTTTCTTATgccattttctttcattttggtTGGACaatatgttgatttttttgcATTGGGAGCTTCTGAATGGAAAAGCTTGAAACCTTTGTTTTTCATGGTTTTAACTGGTTATTTGGCTAAATTCTTTGTTACTTGGATGGCTGCATTGTATTGGAGAATGCCATTTAGAGATGGATTAACTTTTAGCCTCATTATGAGCTTAAGAGGACAAGTTGAACTCATCTTGTTTGTGCATTTGATGGACAAAAAGGTCATCAATGTACCAAGCTTCACATTATTGGTACTAATGACAATAGTATTGACAGCAACTTTCACTCCTCTAGTCTCCATTATATATGATCCAACAAGACCCTACATATTGAACCAAAGGAGGAACATTCAACACAATCCACAAGGTGTAGAACTCAGAATAGTTTTATGCATTTTCGACACCGAAAATATGAATGGATTACTCCATCTACTTGATCGTACCAACCCAACCTCAACCACCACAGTTTCAGTTTCTTCTCTTAGACTAATCCAGCTTGCGGGCCGCGCTACCCCTTTATTCTTCGATCACGCGAAACAAGAAGTTCCTCCAATATATCAATGGACACACACCATAAATGTACTTGCAAGTTTCCAACATATCAGAAGAGAGTTTATGAAAATCCAATTTTTCACTGCCGTGGCTCCCAAGCAATCAATGTTCCAAAACATATGCGAACTTGCGCTCGAACAAGAAGCGTCACTAATCATCTTGCCTTTCATGAATAGAGGATTTTATCAACATGGAACAAGAAGAACGTCGAATTCACAAGTCTTGAATCATGCACCTTGTTCTATTGCAATTCTTGTTGACAAATGTATTGTTGCCGCGGTGGGAAATTCGACGCGGCATTCTAGAAATCGATTCGCCGTGTTGTTTCTTGGAGGTGCCGATGCTAGAGAAGCACTTGTTTATGCGGATAGAATGGTTGAGAACCAAGATGTGTCGCTTACCGTTATAAGGTTTCTTTCTTACAACAATGTAGGGGATAATGAAAGGGAGAAAAAGCTTGATGATGGAATTGTGACATGGTTTTGGGTGAAGAATGAGACAAATACAAGAGTTGTGTATAGAGAAGTTGTAGTTAGGAATGGTGAAGAAACAATTGGAGCAATTCATGATATGAATGATGGTGATTATGATCTTTTGATAGTTGGAAGGAAACGTGGGATTAACCCTGCTATTCTTACAGGGTTATCTGCATGGAGTGAAAGTGATGAGTTAGGAATTATTGGTGATTATGTTAGTTCTAAAGATTTTGATGGCACAGCTTCTGTTTTAGTGGTACAACAACAAGTCCTAAGAggttaa 2316 0.37 MVKHIHGSTISSVSILCQEQSNFHPGGIFYGDNPLTHSFSILMFHLILITTITRTIRFLLKPLKQPVIISQIIGGVIVGPSFLGRSKWYHRHVKPEAAQFLMNNLGIMGFMFFVFVYGVKMDPSLVKKSGKMHVSIALTSITIPTLLVYIVALSLRKQMDKELSAISSIGVIAGYLGITAFPVIYHVLKELNLLNSDVGRFALSTALIGDTIGMGSILAFEAERQGQIRTENAVWFMLSAIVLVTLLLSCVRPAMLWINSKTPEGKPVDQSFIVAILLGIFMMGFITDMFGIAIVNGPLWLGLVVPDGPGLGATMVHRSKTFMNEFLMPFSFILVGQYVDFFALGASEWKSLKPLFFMVLTGYLAKFFVTWMAALYWRMPFRDGLTFSLIMSLRGQVELILFVHLMDKKVINVPSFTLLVLMTIVLTATFTPLVSIIYDPTRPYILNQRRNIQHNPQGVELRIVLCIFDTENMNGLLHLLDRTNPTSTTTVSVSSLRLIQLAGRATPLFFDHAKQEVPPIYQWTHTINVLASFQHIRREFMKIQFFTAVAPKQSMFQNICELALEQEASLIILPFMNRGFYQHGTRRTSNSQVLNHAPCSIAILVDKCIVAAVGNSTRHSRNRFAVLFLGGADAREALVYADRMVENQDVSLTVIRFLSYNNVGDNEREKKLDDGIVTWFWVKNETNTRVVYREVVVRNGEETIGAIHDMNDGDYDLLIVGRKRGINPAILTGLSAWSESDELGIIGDYVSSKDFDGTASVLVVQQQVLRG 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00826 771 PANTHER CATION/H(+) ANTIPORTER 24-RELATED 13 770 - -
Tsu03g00826 771 Pfam Sodium/hydrogen exchanger family 47 434 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu03g00826 771 PANTHER CATION/H + ANTIPORTER 13 770 - -
Tsu03g00826 771 Gene3D - 524 737 - -
Tsu03g00826 771 Gene3D - 40 442 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00826 Tsu-Chr3 7520728 7523908 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00826 16 768 Antiporter Super Family AT5G58460 43.909 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00826 - - gmx:100783296 966.837